| Literature DB >> 28329096 |
Ruthiran Kugathasan1, Dami A Collier2, Lewis J Haddow3,4, Kate El Bouzidi2, Simon G Edwards3, Jonathan D Cartledge3, Robert F Miller3,4,5, Ravindra K Gupta2.
Abstract
Background: Human immunodeficiency virus type 1 (HIV-1) can replicate independently in extravascular compartments such as the central nervous system, resulting in either cerebrospinal fluid (CSF) discordance (viral load [VL] in CSF 0.5 log10 copies HIV-1 RNA greater than plasma VL) or escape (detection of HIV VL >50 copies/mL in CSF in patients with suppressed plasma VL <50 copies/mL). Both discordance and escape may be associated with neurological symptoms. We explored risk factors for CSF discordance and escape in patients presenting with diverse neurological problems.Entities:
Keywords: CSF; HIV; neurocognitive impairment; viral escape; reservoir
Mesh:
Year: 2017 PMID: 28329096 PMCID: PMC5439343 DOI: 10.1093/cid/cix035
Source DB: PubMed Journal: Clin Infect Dis ISSN: 1058-4838 Impact factor: 9.079
Baseline Characteristics for Cerebrospinal Fluid Samples and Individuals
| Characteristic | Overall Denominator, No. | No. (%) |
|---|---|---|
| Male sex | 163 | 115 (70.5) |
| Median age at time of LP, y (IQR) | 163 | 45.3 (39.6–51.5) |
| Total No. of LPs | 163 | |
| No. of LPs per individual | ||
| 1 | 132 (90.4) | |
| 2 | 12 (8.2) | |
| 3 | 1 (0.7) | |
| 4 | 1 (0.7) | |
| CNS viral escape | 163 | 10 (6.1) |
| CNS CSF/plasma discordance | 163 | 24 (14.7) |
| Presenting symptoms | 163 | |
| Acute neurology | 48 (29.4) | |
| Chronic symptoms of neurocognitive impairment | 61 (37.4) | |
| Subacute neurological complaint | 44 (27.0) | |
| Missing information | 5 (3.1) | |
| Follow-up of an earlier problem | 5 (3.1) | |
| Focal neurological signs | 151/163 | 18 (11.9) |
| Status | 163 | |
| Unsuppressed in plasma but no discordance | 60 (36.8) | |
| Discordant and plasma VL detectable | 14 (8.6) | |
| Escape, plasma VL undetectable | 11 (6.8) | |
| Suppressed in both CSF and plasma | 78 (47.8) | |
| Median CSF VL, log10 copies/mL (IQR) | 163 | 1.7 (1.7–3.1) |
| Median plasma VL, log10 copies/mL (IQR) | 163 | 1.7 (1.7–3.8) |
| Median nadir CD4, cells/µL (IQR) | 122/163 | 130 (50–260) |
| Median current CD4, cells/µL (IQR) | 159/163 | 430 (190–620) |
| Undetectable CSF VL | 163 | 98 (60.1) |
| Undetectable plasma VL | 163 | 90 (55.2) |
| On ART (n = 126) | 156/163 | 126 (80.8) |
| On standard ART (3 drugs, 2 classes) | 75 (59.5) | |
| ART regimen containing NRTI | 104 (82.5) | |
| ART regimen containing NNRTI | 31 (24.6) | |
| Combination PI therapy | 75 (59.5) | |
| ART regimen containing integrase inhibitor | 10 (7.9) | |
| ART regimen containing CCR5 inhibitor | 7 (5.6) | |
| ART regimen solely PI monotherapy | 16 (12.7) | |
| CPE score (n = 126) | 156/163 | |
| Low (<7) | 48 (38.1) | |
| Medium (7) | 51 (40.5) | |
| High (>7) | 27 (21.4) | |
| Focal MRI white matter lesions | 136/163 | 42 (30.9) |
| Diffuse MRI white matter lesions | 136/163 | |
| Nil | 84 (61.8) | |
| Subtle | 38 (28.0) | |
| Definite | 14 (10.2) | |
| Parenchymal volume loss | 136/163 | 41 (30.2) |
| Other pathological MRI findings | 136/163 | 35 (25.7) |
Data are presented as No. (%) unless otherwise indicated; no./No. are shown where there are missing data.
Abbreviations: ART, antiretroviral therapy; CNS, central nervous system; CPE, clinical penetration effectiveness; CSF, cerebrospinal fluid; IQR, interquartile range; LP, lumbar puncture; MRI, magnetic resonance imaging; NK, not known; NNRTI, nonnucleoside reverse transcriptase inhibitor; NRTI, nucleoside reverse transcriptase inhibitor; PI, protease inhibitor; VL, viral load.
Factors Associated With Human Immunodeficiency Virus Cerebrospinal Fluid Discordance (n = 163 Lumbar Punctures)
| Characteristic | Univariable Analysis | Multivariable Analysis | ||||
|---|---|---|---|---|---|---|
| Discordant CSF/Plasma | Unadjusted Odds Ratio (95% CI) |
| Adjusted Odds Ratio (95% CI) |
| ||
| No (n = 139) | Yes (n = 24) | |||||
| Male sex: No. of LPs | 98 (71) | 17 (71) | 1.0 (.4–2.6) | .97 | ||
| Male sex | 90 (70) | 11 (61) | 0.7 (.2–1.9) | .43 | ||
| No. of LPs by age, y | ||||||
| 23–38 | 35 (25) | 3 (13) | 1 | .16 | ||
| 39–44 | 33 (24) | 7 (29) | 2.5 (.6–10.6) | |||
| 45–51 | 41 (30) | 6 (25) | 1.7 (.4–7.4) | |||
| 52–80 | 30 (22) | 8 (33) | 3.1 (.7–13.2) | |||
| No. of LPs by presenting symptoms | ||||||
| Acute neurology | 42 (32) | 6 (27) | 1 | .97 | ||
| Chronic symptoms of NCI | 36 (28) | 8 (36) | 1.6 (.5–5.0) | |||
| Subacute neurological complaint | 53 (41) | 8 (36) | 1.1 (.3–3.3) | |||
| Total No. of LPs | ||||||
| 1 | 116 (84) | 16 (67) | 1 | .006 | 1 | .04 |
| 2 | 20 (14) | 4 (17) | 1.5 (.4–4.8) | 1.9 (.5–7.2) | ||
| ≥3 | 3 (2) | 4 (17) | 9.7 (1.8–50.7) | 30.4 (2.1–446.0) | ||
| Median plasma VL, log10 copies/mL (IQR) | 1.7 (1.7–3.8) | 2.1 (1.7–3.8) | .55 | |||
| Median nadir CD4, cells/µL (IQR) (n/N = 122/163) | 130 (40–250) | 152 (50–260) | .76 | |||
| No. of LPs by nadir CD4 category, cells/µL (n/N = | ||||||
| 122/163) | ||||||
| 0–99 | 37 (36) | 7 (37) | ||||
| 100–199 | 30 (29) | 5 (26) | ||||
| >200 | 36 (35) | 7 (37) | ||||
| Median current CD4 count, cells/µL (IQR) (n/N = 159/163) | 430 (180–620) | 445 (330–770) | ||||
| On ART, No. of LPs (n/N = 156/163) | 105 (79) | 21 (91) | ||||
| No. of LPs by CPE category | ||||||
| No ART | 28 (21) | 2 (09) | 1 | .66 | ||
| Low | 37 (28) | 11 (48) | 4.2 (.8–21.3) | |||
| Medium | 46 (35) | 5 (22) | 1.5 (.3–8.5) | |||
| High | 22 (17) | 5 (22) | 3.2 (.5–18.8) | |||
| Using medium CPE as baseline | ||||||
| Off ART | 0.8 (.2–4.0) | |||||
| Low | 3.1 (.8–11.9) | |||||
| Medium | 1 (base) | |||||
| High | 1.9 (.4–8.9) | |||||
| Focal MRI white matter lesions, No. of LPs | 36 (31) | 6 (29) | 0.9 (.3–2.5) | .80 | ||
| Diffuse white matter, No. of LPs | ||||||
| Nil | 79 (66) | 10 (48) | 1 | .02 | 1 | .007 |
| Subtle | 33 (28) | 5 (24) | 1.1 (.4–3.6) | 1.4 (.4–5.4) | ||
| Definite | 8 (7) | 6 (29) | 5.6 (1.5–20.6) | 10.3 (2.3–45.0) | ||
Data are presented as No. (%) unless otherwise indicated; no./No. are shown where there are missing data.
Abbreviations: ART, antiretroviral therapy; CI, confidence interval; CPE, clinical penetration effectiveness score; CSF, cerebrospinal fluid; IQR, interquartile range; LP, lumbar puncture; MRI, magnetic resonance imaging; NCI, neurocognitive impairment; VL, viral load.
χ2 test.
Multiple logistic regression.
Wilcoxon rank-sum test.
Factors Associated With Human Immunodeficiency Virus Cerebrospinal Fluid Escape (n = 88 Lumbar Puncture Episodes)
| Characteristic | CSF/Plasma Viral Escape | Univariable Analysis | Multivariable Analysis | |||
|---|---|---|---|---|---|---|
| No (n = 78) | Yes (n = 10) | Unadjusted Odds Ratio (95% CI) |
| Adjusted Odds Ratio (95% CI) |
| |
| Male sex, No. of LPs | 59 (75.6) | 7 (70.0) | 0.8 (.2–3.2) | .70 | ||
| No. of LPs by age, y | ||||||
| 23–38 | 16 (20.5) | 1 (10) | 1 | .46 | ||
| 39–44 | 21 (26.9) | 3 (30) | 2.3 (.2–25.2) | |||
| 45–51 | 22 (28.2) | 3 (30) | 2.2 (.2–23.9) | |||
| 52–80 | 19 (24.4) | 3 (30) | 2.5 (.2–28.1) | |||
| No. of LPs by presenting symptoms | ||||||
| Acute neurology | 21 (27.6) | 2 (20) | 1 | .45 | ||
| Chronic symptoms of NCI | 20 (26.3) | 2 (20) | 1.1 (.1–8.4) | |||
| Subacute neurological complaint | 35 (46.1) | 6 (60) | 1.8 (.3–9.9) | |||
| Median nadir CD4, cells/µL (IQR) | 152 (90–250) | 230 (25–260) | .64 | |||
| No. of LPs by nadir CD4 category, cells/µL | ||||||
| 0–99 | 15 (26.3) | 2 (28) | .51 | |||
| 100–199 | 20 (35.1) | 1 (14) | ||||
| >200 | 22 (38.6) | 4 (57) | ||||
| Median current CD4, cells/µL (IQR) n/N = (87/88) | 520 (370–710) | 470 (420–600) | .87 | |||
| On ART | 75 (97.4) | 10 (100) | … | |||
| CPE category, No. of LPs | ||||||
| Low | 28 (36) | 3 (30) | 1 | .38 | ||
| Medium | 32 (41) | 3 (30) | 0.9 (.2–4.8) | |||
| High | 18 (23) | 4 (40) | 2.1 (.4–10.7) | |||
| Focal MRI white matter lesions (n/N = 28/76) | 24 (36) | 4 (40) | 1.2 (.3–4.6) | .83 | ||
| Diffuse white matter, No. of LPs | ||||||
| Nil | 49 (74) | 4 (40) | 1 | .003 | 1 | .01 |
| Subtle | 15 (23) | 3 (30) | 2.5 (.5–12.5) | 2.7 (.4–17.9) | ||
| Definite | 3 (3) | 3 (30) | 18.4 (1.8–188.6) | 56.9 (4.0–822.8) | ||
Data are presented as No. (%) unless otherwise indicated; no./No. are shown where there are missing data.
Abbreviations: ART, antiretroviral therapy; CI, confidence interval; CPE, clinical penetration effectiveness score; CSF, cerebrospinal fluid; IQR, interquartile range; LP, lumbar puncture; MRI, magnetic resonance imaging; NCI, neurocognitive impairment.
χ2 test.
Multiple logistic regression.
Wilcoxon rank-sum test.
Information on Individuals with Cerebrospinal Fluid Escape (n = 7)
| Age at LP, | Year of HIV Diagnosis | CD4 at LP, | Nadir CD4, | Year of LP | Sex | ART at | Resistance | Interpretation of Mutation |
|---|---|---|---|---|---|---|---|---|
| 44 | 2000 | 980 | 260 | 2014 | M | RAL, MVC, DRV/r | Protease: L10I/V | Reduced PI susceptibility |
| 33 | 2004 | 600 | 152 | 2011 | F | ATV/r, TDF | RT: M184V (2004) | High level resistance to 3TC and FTC |
| RT: K103N (2004) | Reduced susceptibility to EFV and NVP | |||||||
| 51 | 2004 | 440 | 2012 | M | ATV/r, | RT: K103N (2004) | Reduced susceptibility to EFV and NVP | |
| 55 | 1996 | 420 | 20 | 2013 | M | DRV/r, RAL, MVC | RT: L210W (2011) | ZDV resistance |
| RT: T215Y | Intermediate/high-level resistance to ZDV and d4T, low-level resistance to ddI, and potentially low-level resistance to ABC and TDF. | |||||||
| RT: V108IV | Associated with NRTI resistance | |||||||
| RT: Y181C | Reduced susceptibility to NNRTI | |||||||
| 41 | 1995 | 490 | 25 | 2013 | F | DRV/r, RAL, TDF | RT: V75I | |
| RT: Q151M | High-level resistance to ZDV, d4T, ddI, and ABC | |||||||
| RT: D67N | ||||||||
| RT: K70N | ||||||||
| 42 | 2000 | 1360 | 2012 | F | LPV/r, TDF | RT: 67N 70R 215Y | ZDV/ddI resistance | |
| RT: M184V | ||||||||
| RT: K219EK | ||||||||
| 50 | 1997 | 450 | 2014 | F | Off ART 08/2014 | Resistance testing not performed | ||
| ABC/ZDV/3TC, DRV/r |
Abbreviations: 3TC, lamivudine; ABC, abacavir; ART, antiretroviral therapy; ATV/r, ritonavir-boosted atazanavir; d4T, stavudine; ddI, didanosine; DRV/r, ritonavir-boosted darunavir; EFV, efavirenz; F, female; FTC, emtricitabine; HIV, human immunodeficiency virus; LP, lumbar puncture; LPV/r, ritonavir-boosted lopinavir; M, male; MVC, maraviroc; NNRTI, nonnucleoside reverse transcriptase inhibitor; NRTI, nucleoside reverse transcriptase inhibitor; NVP, nevirapine; PI, protease inhibitor; RAL, raltegravir; RT, reverse transcriptase; TDF, tenofovir disoproxil fumarate; ZDV, zidovudine.