Literature DB >> 2832392

RNA polymerase-binding and transcription initiation sites upstream of the methyl reductase operon of Methanococcus vannielii.

M Thomm1, B A Sherf, J N Reeve.   

Abstract

RNA polymerase, purified from Methanococcus vannielii, was shown by exonuclease III footprinting to bind to a 49-base-pair (bp) region of DNA in the intergenic region upstream of mcrB. S1 nuclease protection experiments demonstrated that transcription initiation in vivo occurs within this region at 32 or 33 bp 5' to the ATG translation initiation codon of mcrB and 19 or 20 bp 3' to a TATA box.

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Year:  1988        PMID： 2832392      PMCID： PMC211058          DOI： 10.1128/jb.170.4.1958-1961.1988

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  DNA-dependent RNA polymerases of the three orders of methanogens.

Authors:  M Thomm; J Madon; K O Stetter
Journal:  Biol Chem Hoppe Seyler       Date:  1986-06

2.  An exonuclease protection assay reveals heat-shock element and TATA box DNA-binding proteins in crude nuclear extracts.

Authors:  C Wu
Journal:  Nature       Date:  1985 Sep 5-11       Impact factor: 49.962

3.  Transcription signals for stable RNA genes in Methanococcus.

Authors:  G Wich; H Hummel; M Jarsch; U Bär; A Böck
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

4.  The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.

Authors:  J Vieira; J Messing
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

5.  Transcription in methanogens. Evidence for specific in vitro transcription of the purified DNA-dependent RNA polymerase of Methanococcus thermolithotrophicus.

Authors:  M Thomm; K O Stetter
Journal:  Eur J Biochem       Date:  1985-06-03

6.  Mapping of SV40 DNA replication origin region binding sites for the SV40 T antigen by protection against exonuclease III digestion.

Authors:  D Shalloway; T Kleinberger; D M Livingston
Journal:  Cell       Date:  1980-06       Impact factor: 41.582

7.  Putative promoter elements for the ribosomal RNA genes of the thermoacidophilic archaebacterium Sulfolobus sp. strain B12.

Authors:  W D Reiter; P Palm; W Voos; J Kaniecki; B Grampp; W Schulz; W Zillig
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

8.  Structure and expression of the genes, mcrBDCGA, which encode the subunits of component C of methyl coenzyme M reductase in Methanococcus vannielii.

Authors:  D S Cram; B A Sherf; R T Libby; R J Mattaliano; K L Ramachandran; J N Reeve
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

9.  Structure of genes and an insertion element in the methane producing archaebacterium Methanobrevibacter smithii.

Authors:  P T Hamilton; J N Reeve
Journal:  Mol Gen Genet       Date:  1985

10.  Genes for stable RNA in the extreme thermophile Thermoproteus tenax: introns and transcription signals.

Authors:  G Wich; W Leinfelder; A Böck
Journal:  EMBO J       Date:  1987-02       Impact factor: 11.598
  10 in total
  11 in total

1.  Elements of an archaeal promoter defined by mutational analysis.

Authors:  J Hain; W D Reiter; U Hüdepohl; W Zillig
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

2.  Transcription in vivo and in vitro of the histone-encoding gene hmfB from the hyperthermophilic archaeon Methanothermus fervidus.

Authors:  M Thomm; K Sandman; G Frey; G Koller; J N Reeve
Journal:  J Bacteriol       Date:  1992-06       Impact factor: 3.490

3.  Specific transcription of cloned Methanobacterium thermoautotrophicum transcription units by homologous RNA polymerase in vitro.

Authors:  S Knaub; A Klein
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

4.  Conservation of structure in the human gene encoding argininosuccinate synthetase and the argG genes of the archaebacteria Methanosarcina barkeri MS and Methanococcus vannielii.

Authors:  C J Morris; J N Reeve
Journal:  J Bacteriol       Date:  1988-07       Impact factor: 3.490

5.  Promoter recognition in archaea is mediated by transcription factors: identification of transcription factor aTFB from Methanococcus thermolithotrophicus as archaeal TATA-binding protein.

Authors:  H P Gohl; B Gröndahl; M Thomm
Journal:  Nucleic Acids Res       Date:  1995-10-11       Impact factor: 16.971

6.  Structure and comparative analysis of the genes encoding component C of methyl coenzyme M reductase in the extremely thermophilic archaebacterium Methanothermus fervidus.

Authors:  C F Weil; D S Cram; B A Sherf; J N Reeve
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

7.  An archaebacterial cell-free transcription system. The expression of tRNA genes from Methanococcus vannielii is mediated by a transcription factor.

Authors:  G Frey; M Thomm; B Brüdigam; H P Gohl; W Hausner
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

8.  Cloning of the trp genes from the archaebacterium Methanococcus voltae: nucleotide sequence of the trpBA genes.

Authors:  L Sibold; M Henriquet
Journal:  Mol Gen Genet       Date:  1988-11

9.  Characterization of the upstream region of the formate dehydrogenase operon of Methanobacterium formicicum.

Authors:  P S Patel; J G Ferry
Journal:  J Bacteriol       Date:  1988-08       Impact factor: 3.490

10.  Shuttle vectors for the archaebacterium Halobacterium volcanii.

Authors:  W L Lam; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205
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