Literature DB >> 28322404

Device and programming abstractions for spatiotemporal control of active micro-particle swarms.

Amy T Lam1, Karina G Samuel-Gama1, Jonathan Griffin1, Matthew Loeun1, Lukas C Gerber1, Zahid Hossain1, Nate J Cira1, Seung Ah Lee1, Ingmar H Riedel-Kruse1.   

Abstract

We present a hardware setup and a set of executable commands for spatiotemporal programming and interactive control of a swarm of self-propelled microscopic agents inside a microfluidic chip. In particular, local and global spatiotemporal light stimuli are used to direct the motion of ensembles of Euglena gracilis, a unicellular phototactic organism. We develop three levels of programming abstractions (stimulus space, swarm space, and system space) to create a scripting language for directing swarms. We then implement a multi-level proof-of-concept biotic game using these commands to demonstrate their utility. These device and programming concepts will enhance our capabilities for manipulating natural and synthetic swarms, with future applications for on-chip processing, diagnostics, education, and research on collective behaviors.

Entities:  

Year:  2017        PMID: 28322404     DOI: 10.1039/c7lc00131b

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  6 in total

Review 1.  "Learning on a chip:" Microfluidics for formal and informal science education.

Authors:  Darius G Rackus; Ingmar H Riedel-Kruse; Nicole Pamme
Journal:  Biomicrofluidics       Date:  2019-07-09       Impact factor: 2.800

2.  Scientific Discovery Games for Biomedical Research.

Authors:  Rhiju Das; Benjamin Keep; Peter Washington; Ingmar H Riedel-Kruse
Journal:  Annu Rev Biomed Data Sci       Date:  2019-07

3.  Phototactic microswimmers in pulsatile flow: Toward a novel harvesting method.

Authors:  Chau Nguyen Minh; Hassan Peerhossaini; Mojtaba Jarrahi
Journal:  Biomicrofluidics       Date:  2022-09-27       Impact factor: 3.258

Review 4.  Microfluidic and mathematical modeling of aquatic microbial communities.

Authors:  Fangchen Liu; Andrea Giometto; Mingming Wu
Journal:  Anal Bioanal Chem       Date:  2020-11-26       Impact factor: 4.142

5.  Low cost and open source multi-fluorescence imaging system for teaching and research in biology and bioengineering.

Authors:  Isaac Nuñez; Tamara Matute; Roberto Herrera; Juan Keymer; Timothy Marzullo; Timothy Rudge; Fernán Federici
Journal:  PLoS One       Date:  2017-11-15       Impact factor: 3.240

6.  Interactive programming paradigm for real-time experimentation with remote living matter.

Authors:  Peter Washington; Karina G Samuel-Gama; Shirish Goyal; Ashwin Ramaswami; Ingmar H Riedel-Kruse
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-01       Impact factor: 11.205

  6 in total

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