Literature DB >> 28318242

Whole Blood Metabolomics by 1H NMR Spectroscopy Provides a New Opportunity To Evaluate Coenzymes and Antioxidants.

G A Nagana Gowda, Daniel Raftery1.   

Abstract

Conventional human blood metabolomics employs serum or plasma and provides a wealth of metabolic information therein. However, this approach lacks the ability to measure and evaluate important metabolites such as coenzymes and antioxidants that are present at high concentrations in red blood cells. As an important alternative to serum/plasma metabolomics, we show here that a simple 1H NMR experiment can simultaneously measure coenzymes and antioxidants in extracts of whole human blood, in addition to the nearly 70 metabolites that were shown to be quantitated in serum/plasma recently [ Anal. Chem. 2015 , 87 , 706 - 715 ]. Coenzymes of redox reactions: oxidized/reduced nicotinamide adenine dinucleotide (NAD+ and NADH) and nicotinamide adenine dinucleotide phosphate (NADP+ and NADPH); coenzymes of energy including adenosine triphosphate (ATP), adenosine diphosphate (ADP), and adenosine monophosphate (AMP); and antioxidants, the sum of oxidized and reduced glutathione (GSSG and GSH) can be measured with essentially no additional effort. A new method was developed for detecting many of these unstable species without affecting other blood/blood plasma metabolites. The identities of coenzymes and antioxidants in blood NMR spectra were established combining 1D/2D NMR techniques, chemical shift databases, pH measurements and, finally, spiking with authentic compounds. This is the first study to report identification of major coenzymes and antioxidants and quantify them, simultaneously, with the large pool of other metabolites in human blood using NMR spectroscopy. Considering that the levels of coenzymes and antioxidants represent a sensitive measure of cellular functions in health and numerous diseases, the NMR method presented here potentially opens a new chapter in the metabolomics of blood.

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Year:  2017        PMID: 28318242      PMCID: PMC6245939          DOI: 10.1021/acs.analchem.7b00171

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  39 in total

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Journal:  Clin Chim Acta       Date:  1965-08       Impact factor: 3.786

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4.  Early detection of graft failure using the blood metabolic profile of a liver recipient.

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Journal:  Transplantation       Date:  2007-02-27       Impact factor: 4.939

Review 5.  Overview of pyridine nucleotides review series.

Authors:  Michinari Nakamura; Aruni Bhatnagar; Junichi Sadoshima
Journal:  Circ Res       Date:  2012-08-17       Impact factor: 17.367

Review 6.  Regulation of cell survival and death by pyridine nucleotides.

Authors:  Shin-Ichi Oka; Chiao-Po Hsu; Junichi Sadoshima
Journal:  Circ Res       Date:  2012-08-17       Impact factor: 17.367

Review 7.  Multidimensional approaches to NMR-based metabolomics.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2013-11-22       Impact factor: 6.986

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Journal:  Cardiovasc Res       Date:  1992-01       Impact factor: 10.787

9.  Unexpected similarities between the Schizosaccharomyces and human blood metabolomes, and novel human metabolites.

Authors:  Romanas Chaleckis; Masahiro Ebe; Tomáš Pluskal; Itsuo Murakami; Hiroshi Kondoh; Mitsuhiro Yanagida
Journal:  Mol Biosyst       Date:  2014-10

10.  Simultaneous Analysis of Major Coenzymes of Cellular Redox Reactions and Energy Using ex Vivo (1)H NMR Spectroscopy.

Authors:  G A Nagana Gowda; Lauren Abell; Chi Fung Lee; Rong Tian; Daniel Raftery
Journal:  Anal Chem       Date:  2016-04-14       Impact factor: 6.986

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  23 in total

1.  Analysis of Coenzymes and Antioxidants in Tissue and Blood Using 1D 1H NMR Spectroscopy.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Methods Mol Biol       Date:  2019

2.  Pharmacometabolomics reveals a role for histidine, phenylalanine, and threonine in the development of paclitaxel-induced peripheral neuropathy.

Authors:  Yihan Sun; Jae Hyun Kim; Kiran Vangipuram; Daniel F Hayes; Ellen M L Smith; Larisa Yeomans; N Lynn Henry; Kathleen A Stringer; Daniel L Hertz
Journal:  Breast Cancer Res Treat       Date:  2018-06-26       Impact factor: 4.872

3.  Evaluation of sample preparation protocols for quantitative NMR-based metabolomics.

Authors:  Olga A Snytnikova; Anastasiya A Khlichkina; Renad Z Sagdeev; Yuri P Tsentalovich
Journal:  Metabolomics       Date:  2019-05-24       Impact factor: 4.290

4.  Extending the Scope of 1H NMR Spectroscopy for the Analysis of Cellular Coenzyme A and Acetyl Coenzyme A.

Authors:  G A Nagana Gowda; Lauren Abell; Rong Tian
Journal:  Anal Chem       Date:  2019-01-17       Impact factor: 6.986

5.  Real-Time Pure Shift HSQC NMR for Untargeted Metabolomics.

Authors:  István Timári; Cheng Wang; Alexandar L Hansen; Gilson Costa Dos Santos; Sung Ok Yoon; Lei Bruschweiler-Li; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2019-01-16       Impact factor: 6.986

6.  Extractive Ratio Analysis NMR Spectroscopy for Metabolite Identification in Complex Biological Mixtures.

Authors:  Liladhar Paudel; G A Nagana Gowda; Daniel Raftery
Journal:  Anal Chem       Date:  2019-05-14       Impact factor: 6.986

7.  Evaluation of Fumaric Acid and Maleic Acid as Internal Standards for NMR Analysis of Protein Precipitated Plasma, Serum, and Whole Blood.

Authors:  G A Nagana Gowda; Natalie N Hong; Daniel Raftery
Journal:  Anal Chem       Date:  2021-02-04       Impact factor: 6.986

8.  NMR-Based Metabolomics.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

9.  The Effect of Blood Contained in the Samples on the Metabolomic Profile of Mouse Brain Tissue: A Study by NMR Spectroscopy.

Authors:  Anastasia Glinskikh; Olga Snytnikova; Ekaterina Zelentsova; Maria Borisova; Yuri Tsentalovich; Andrey Akulov
Journal:  Molecules       Date:  2021-05-22       Impact factor: 4.411

10.  Analytical considerations for reducing the matrix effect for the sphingolipidome quantification in whole blood.

Authors:  Dezhen Wang; Peining Xu; Clementina Mesaros
Journal:  Bioanalysis       Date:  2021-06-10       Impact factor: 2.681

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