Literature DB >> 28303019

Integration of optogenetics with complementary methodologies in systems neuroscience.

Christina K Kim1, Avishek Adhikari2, Karl Deisseroth2,3,4.   

Abstract

Modern optogenetics can be tuned to evoke activity that corresponds to naturally occurring local or global activity in timing, magnitude or individual-cell patterning. This outcome has been facilitated not only by the development of core features of optogenetics over the past 10 years (microbial-opsin variants, opsin-targeting strategies and light-targeting devices) but also by the recent integration of optogenetics with complementary technologies, spanning electrophysiology, activity imaging and anatomical methods for structural and molecular analysis. This integrated approach now supports optogenetic identification of the native, necessary and sufficient causal underpinnings of physiology and behaviour on acute or chronic timescales and across cellular, circuit-level or brain-wide spatial scales.

Entities:  

Mesh:

Year:  2017        PMID: 28303019      PMCID: PMC5708544          DOI: 10.1038/nrn.2017.15

Source DB:  PubMed          Journal:  Nat Rev Neurosci        ISSN: 1471-003X            Impact factor:   34.870


  156 in total

1.  Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity.

Authors:  Andre Berndt; Soo Yeun Lee; Jonas Wietek; Charu Ramakrishnan; Elizabeth E Steinberg; Asim J Rashid; Hoseok Kim; Sungmo Park; Adam Santoro; Paul W Frankland; Shrivats M Iyer; Sally Pak; Sofie Ährlund-Richter; Scott L Delp; Robert C Malenka; Sheena A Josselyn; Marie Carlén; Peter Hegemann; Karl Deisseroth
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-22       Impact factor: 11.205

2.  An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.

Authors:  Alexander M Aravanis; Li-Ping Wang; Feng Zhang; Leslie A Meltzer; Murtaza Z Mogri; M Bret Schneider; Karl Deisseroth
Journal:  J Neural Eng       Date:  2007-05-31       Impact factor: 5.379

3.  Wireless magnetothermal deep brain stimulation.

Authors:  Ritchie Chen; Gabriela Romero; Michael G Christiansen; Alan Mohr; Polina Anikeeva
Journal:  Science       Date:  2015-03-12       Impact factor: 47.728

4.  Rational design of a high-affinity, fast, red calcium indicator R-CaMP2.

Authors:  Masatoshi Inoue; Atsuya Takeuchi; Shin-ichiro Horigane; Masamichi Ohkura; Keiko Gengyo-Ando; Hajime Fujii; Satoshi Kamijo; Sayaka Takemoto-Kimura; Masanobu Kano; Junichi Nakai; Kazuo Kitamura; Haruhiko Bito
Journal:  Nat Methods       Date:  2014-11-24       Impact factor: 28.547

5.  Elucidating an Affective Pain Circuit that Creates a Threat Memory.

Authors:  Sung Han; Matthew T Soleiman; Marta E Soden; Larry S Zweifel; Richard D Palmiter
Journal:  Cell       Date:  2015-07-16       Impact factor: 41.582

6.  Excitatory transmission from the amygdala to nucleus accumbens facilitates reward seeking.

Authors:  Garret D Stuber; Dennis R Sparta; Alice M Stamatakis; Wieke A van Leeuwen; Juanita E Hardjoprajitno; Saemi Cho; Kay M Tye; Kimberly A Kempadoo; Feng Zhang; Karl Deisseroth; Antonello Bonci
Journal:  Nature       Date:  2011-06-29       Impact factor: 49.962

7.  Tuning arousal with optogenetic modulation of locus coeruleus neurons.

Authors:  Matthew E Carter; Ofer Yizhar; Sachiko Chikahisa; Hieu Nguyen; Antoine Adamantidis; Seiji Nishino; Karl Deisseroth; Luis de Lecea
Journal:  Nat Neurosci       Date:  2010-10-31       Impact factor: 24.884

8.  The participation of cortical amygdala in innate, odour-driven behaviour.

Authors:  Cory M Root; Christine A Denny; René Hen; Richard Axel
Journal:  Nature       Date:  2014-11-05       Impact factor: 49.962

9.  Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits.

Authors:  Talia N Lerner; Carrie Shilyansky; Thomas J Davidson; Kathryn E Evans; Kevin T Beier; Kelly A Zalocusky; Ailey K Crow; Robert C Malenka; Liqun Luo; Raju Tomer; Karl Deisseroth
Journal:  Cell       Date:  2015-07-30       Impact factor: 41.582

10.  Enhancement of encoding and retrieval functions through theta phase-specific manipulation of hippocampus.

Authors:  Joshua H Siegle; Matthew A Wilson
Journal:  Elife       Date:  2014-07-29       Impact factor: 8.140

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  174 in total

1.  A nanofabricated optoelectronic probe for manipulating and recording neural dynamics.

Authors:  Bingzhao Li; Kwang Lee; Sotiris C Masmanidis; Mo Li
Journal:  J Neural Eng       Date:  2018-04-09       Impact factor: 5.379

Review 2.  Nitric oxide signalling in the brain and its control of bodily functions.

Authors:  Konstantina Chachlaki; Vincent Prevot
Journal:  Br J Pharmacol       Date:  2019-09-08       Impact factor: 8.739

3.  Theoretical optimization of high-frequency optogenetic spiking of red-shifted very fast-Chrimson-expressing neurons.

Authors:  Neha Gupta; Himanshu Bansal; Sukhdev Roy
Journal:  Neurophotonics       Date:  2019-04-11       Impact factor: 3.593

Review 4.  Resolving the Micro-Macro Disconnect to Address Core Features of Seizure Networks.

Authors:  Jordan S Farrell; Quynh-Anh Nguyen; Ivan Soltesz
Journal:  Neuron       Date:  2019-03-20       Impact factor: 17.173

5.  Nonhuman Primate Optogenetics: Current Status and Future Prospects.

Authors:  Ken-Ichi Inoue; Masayuki Matsumoto; Masahiko Takada
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

6.  Multifunctional materials for implantable and wearable photonic healthcare devices.

Authors:  Geon-Hui Lee; Hanul Moon; Hyemin Kim; Gae Hwang Lee; Woosung Kwon; Seunghyup Yoo; David Myung; Seok Hyun Yun; Zhenan Bao; Sei Kwang Hahn
Journal:  Nat Rev Mater       Date:  2020-01-07       Impact factor: 66.308

7.  Ultrafast optogenetic stimulation of the auditory pathway by targeting-optimized Chronos.

Authors:  Daniel Keppeler; Ricardo Martins Merino; David Lopez de la Morena; Burak Bali; Antoine Tarquin Huet; Anna Gehrt; Christian Wrobel; Swati Subramanian; Tobias Dombrowski; Fred Wolf; Vladan Rankovic; Andreas Neef; Tobias Moser
Journal:  EMBO J       Date:  2018-11-05       Impact factor: 11.598

8.  Engineering Improved Photoswitches for the Control of Nucleocytoplasmic Distribution.

Authors:  Andrew M Lerner; Hayretin Yumerefendi; Odessa J Goudy; Brian D Strahl; Brian Kuhlman
Journal:  ACS Synth Biol       Date:  2018-11-29       Impact factor: 5.110

9.  Contemporary strategies for dissecting the neuronal basis of neurodevelopmental disorders.

Authors:  Dong-Oh Seo; Laura E Motard; Michael R Bruchas
Journal:  Neurobiol Learn Mem       Date:  2018-03-14       Impact factor: 2.877

10.  The BioLuminescent-OptoGenetic in vivo response to coelenterazine is proportional, sensitive, and specific in neocortex.

Authors:  Manuel Gomez-Ramirez; Alexander I More; Nina G Friedman; Ute Hochgeschwender; Christopher I Moore
Journal:  J Neurosci Res       Date:  2019-09-23       Impact factor: 4.164

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