Literature DB >> 10972320

Adaptive, template moderated, spatially varying statistical classification.

S K Warfield1, M Kaus, F A Jolesz, R Kikinis.   

Abstract

A novel image segmentation algorithm was developed to allow the automatic segmentation of both normal and abnormal anatomy from medical images. The new algorithm is a form of spatially varying statistical classification, in which an explicit anatomical template is used to moderate the segmentation obtained by statistical classification. The algorithm consists of an iterated sequence of spatially varying classification and nonlinear registration, which forms an adaptive, template moderated (ATM), spatially varying statistical classification (SVC). Classification methods and nonlinear registration methods are often complementary, both in the tasks where they succeed and in the tasks where they fail. By integrating these approaches the new algorithm avoids many of the disadvantages of each approach alone while exploiting the combination. The ATM SVC algorithm was applied to several segmentation problems, involving different image contrast mechanisms and different locations in the body. Segmentation and validation experiments were carried out for problems involving the quantification of normal anatomy (MRI of brains of neonates) and pathology of various types (MRI of patients with multiple sclerosis, MRI of patients with brain tumors, MRI of patients with damaged knee cartilage). In each case, the ATM SVC algorithm provided a better segmentation than statistical classification or elastic matching alone.

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Year:  2000        PMID: 10972320     DOI: 10.1016/s1361-8415(00)00003-7

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  73 in total

1.  Longitudinally guided level sets for consistent tissue segmentation of neonates.

Authors:  Li Wang; Feng Shi; Pew-Thian Yap; Weili Lin; John H Gilmore; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2011-12-03       Impact factor: 5.038

2.  Accurate template-based correction of brain MRI intensity distortion with application to dementia and aging.

Authors:  C Studholme; V Cardenas; E Song; F Ezekiel; A Maudsley; M Weiner
Journal:  IEEE Trans Med Imaging       Date:  2004-01       Impact factor: 10.048

3.  Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

4.  LOGISMOS--layered optimal graph image segmentation of multiple objects and surfaces: cartilage segmentation in the knee joint.

Authors:  Yin Yin; Xiangmin Zhang; Rachel Williams; Xiaodong Wu; Donald D Anderson; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2010-07-19       Impact factor: 10.048

5.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

6.  Semi-automatic segmentation software for quantitative clinical brain glioblastoma evaluation.

Authors:  Ying Zhu; Geoffrey S Young; Zhong Xue; Raymond Y Huang; Hui You; Kian Setayesh; Hiroto Hatabu; Fei Cao; Stephen T Wong
Journal:  Acad Radiol       Date:  2012-05-15       Impact factor: 3.173

7.  An in vivo MRI study of prefrontal cortical complexity in first-episode psychosis.

Authors:  Laura C Wiegand; Simon K Warfield; James J Levitt; Yoshio Hirayasu; Dean F Salisbury; Stephan Heckers; Sylvain Bouix; Daniel Schwartz; Magdalena Spencer; Chandlee C Dickey; Ron Kikinis; Ferenc A Jolesz; Robert W McCarley; Martha E Shenton
Journal:  Am J Psychiatry       Date:  2005-01       Impact factor: 18.112

8.  Image registration driven by combined probabilistic and geometric descriptors.

Authors:  Linh Ha; Marcel Prastawa; Guido Gerig; John H Gilmore; Cláudio T Silva; Sarang Joshi
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

9.  Neonatal cerebral morphometry and later risk of persistent inattention/hyperactivity in children born very preterm.

Authors:  Samudragupta Bora; Verena E Pritchard; Zhe Chen; Terrie E Inder; Lianne J Woodward
Journal:  J Child Psychol Psychiatry       Date:  2014-01-20       Impact factor: 8.982

10.  FULLY CONVOLUTIONAL NETWORKS FOR MULTI-MODALITY ISOINTENSE INFANT BRAIN IMAGE SEGMENTATION.

Authors:  Dong Nie; Li Wang; Yaozong Gao; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016
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