Literature DB >> 28300404

Structural Basis of Small-Molecule Aggregate Induced Inhibition of a Protein-Protein Interaction.

Jonathan M Blevitt1, Michael D Hack2, Krystal L Herman1, Paul F Jackson1, Paul J Krawczuk3, Alec D Lebsack4, Annie X Liu5, Taraneh Mirzadegan2, Marina I Nelen6, Aaron N Patrick5, Stefan Steinbacher7, Marcos E Milla1, Kevin J Lumb5.   

Abstract

A prevalent observation in high-throughput screening and drug discovery programs is the inhibition of protein function by small-molecule compound aggregation. Here, we present the X-ray structural description of aggregation-based inhibition of a protein-protein interaction involving tumor necrosis factor α (TNFα). An ordered conglomerate of an aggregating small-molecule inhibitor (JNJ525) induces a quaternary structure switch of TNFα that inhibits the protein-protein interaction between TNFα and TNFα receptors. SPD-304 may employ a similar mechanism of inhibition.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28300404     DOI: 10.1021/acs.jmedchem.6b01836

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  17 in total

1.  Tumor Necrosis Factor-α Trimer Disassembly and Inactivation via Peptide-Small Molecule Synergy.

Authors:  James W Checco; Geoffrey A Eddinger; Nicholas J Rettko; Alexander R Chartier; Samuel H Gellman
Journal:  ACS Chem Biol       Date:  2020-07-14       Impact factor: 5.100

Review 2.  Breaking the Fourth Wall: Modulating Quaternary Associations for Protein Regulation and Drug Discovery.

Authors:  Marcus J C Long; Dziyana Hnedzko; Bo Kyoung Kim; Yimon Aye
Journal:  Chembiochem       Date:  2019-04-01       Impact factor: 3.164

3.  Mechanisms of Specific versus Nonspecific Interactions of Aggregation-Prone Inhibitors and Attenuators.

Authors:  Stephen Boulton; Rajeevan Selvaratnam; Rashik Ahmed; Katherine Van; Xiaodong Cheng; Giuseppe Melacini
Journal:  J Med Chem       Date:  2019-05-10       Impact factor: 7.446

4.  Colloidal Aggregators in Biochemical SARS-CoV-2 Repurposing Screens.

Authors:  Henry R O'Donnell; Tia A Tummino; Conner Bardine; Charles S Craik; Brian K Shoichet
Journal:  J Med Chem       Date:  2021-11-23       Impact factor: 7.446

Review 5.  Inhibitors of protein-protein interactions (PPIs): an analysis of scaffold choices and buried surface area.

Authors:  Xu Ran; Jason E Gestwicki
Journal:  Curr Opin Chem Biol       Date:  2018-06-13       Impact factor: 8.822

6.  A Crowding Barrier to Protein Inhibition in Colloidal Aggregates.

Authors:  Parnian Lak; Henry O'Donnell; Xuewen Du; Matthew P Jacobson; Brian K Shoichet
Journal:  J Med Chem       Date:  2021-03-24       Impact factor: 7.446

Review 7.  Nuisance compounds in cellular assays.

Authors:  Jayme L Dahlin; Douglas S Auld; Ina Rothenaigner; Steve Haney; Jonathan Z Sexton; J Willem M Nissink; Jarrod Walsh; Jonathan A Lee; John M Strelow; Francis S Willard; Lori Ferrins; Jonathan B Baell; Michael A Walters; Bruce K Hua; Kamyar Hadian; Bridget K Wagner
Journal:  Cell Chem Biol       Date:  2021-02-15       Impact factor: 8.116

Review 8.  Choose and Use Your Chemical Probe Wisely to Explore Cancer Biology.

Authors:  Julian Blagg; Paul Workman
Journal:  Cancer Cell       Date:  2017-07-10       Impact factor: 31.743

9.  In Silico Discovery of Plant-Origin Natural Product Inhibitors of Tumor Necrosis Factor (TNF) and Receptor Activator of NF-κB Ligand (RANKL).

Authors:  Georgia Melagraki; Evangelos Ntougkos; Dimitra Papadopoulou; Vagelis Rinotas; Georgios Leonis; Eleni Douni; Antreas Afantitis; George Kollias
Journal:  Front Pharmacol       Date:  2018-07-25       Impact factor: 5.810

10.  Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.

Authors:  Shan-Meng Lin; Shih-Chao Lin; Jia-Ning Hsu; Chung-Ke Chang; Ching-Ming Chien; Yong-Sheng Wang; Hung-Yi Wu; U-Ser Jeng; Kylene Kehn-Hall; Ming-Hon Hou
Journal:  J Med Chem       Date:  2020-03-11       Impact factor: 7.446

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.