Literature DB >> 28298448

Evaluation of Altona Diagnostics RealStar Zika Virus Reverse Transcription-PCR Test Kit for Zika Virus PCR Testing.

Arnaud G L'Huillier1, Ernesto Lombos2, Elaine Tang2, Stephen Perusini2, Alireza Eshaghi2, Sandeep Nagra2, Christine Frantz2, Romy Olsha2, Erik Kristjanson2, Kristina Dimitrova3, David Safronetz3, Mike Drebot3, Jonathan B Gubbay4,2,5.   

Abstract

With the emerging Zika virus (ZIKV) epidemic, accessible real-time reverse transcription-PCR (rRT-PCR) assays are needed to streamline testing. The commercial Altona Diagnostics RealStar ZIKV rRT-PCR test kit (Altona PCR) has been approved for emergency use authorization by the U.S. FDA. Our aim was to verify the Altona PCR by comparing it to the CDC-designed dual-target ZIKV rRT-PCR reference assay (reference PCR) and describe the demographics of patients tested for ZIKV by rRT-PCR in Ontario, Canada. A large set of clinical specimens was tested for ZIKV by the Altona PCR and the reference PCR. Positive or equivocal specimens underwent PCR and Sanger sequencing targeting the ZIKV NS5 gene. A total of 671 serum specimens were tested by the reference PCR: 58 (8.6%) were positive, 193 (28.8%) were equivocal, and 420 (62.6%) were negative. Ninety percent of the reference PCR-positive patients were tested in the first 5 days after symptom onset. The Altona PCR was performed on 284/671 specimens tested by the reference PCR. The Altona PCR was positive for 53/58 (91%) reference PCR-positive specimens and 16/193 (8%) reference PCR-equivocal specimens; the ZIKV NS5 PCR was positive for all 68 Altona PCR-positive specimens and negative for all 181 Altona PCR-negative specimens that underwent the NS5 PCR. The Altona PCR has very good sensitivity (91%) and specificity (97%) compared to the reference PCR. The Altona PCR can be used for ZIKV diagnostic testing and has less extensive verification requirements than a laboratory-developed test.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  PCR; Zika virus; diagnostic testing; flavivirus

Mesh:

Substances:

Year:  2017        PMID: 28298448      PMCID: PMC5405276          DOI: 10.1128/JCM.02153-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  24 in total

1.  Detection of Zika virus in Brazilian patients during the first five days of infection - urine versus plasma.

Authors:  Rodrigo Pessôa; João Veras Patriota; Maria de Lourdes de Souza; Ahmed Abd El Wahed; Sabri Saeed Sanabani
Journal:  Euro Surveill       Date:  2016-07-28

2.  Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses.

Authors:  G Kuno; G-J J Chang
Journal:  Arch Virol       Date:  2007-01-03       Impact factor: 2.574

3.  Interim Guidance for Zika Virus Testing of Urine - United States, 2016.

Authors: 
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2016-05-13       Impact factor: 17.586

4.  A report on the outbreak of Zika virus on Easter Island, South Pacific, 2014.

Authors:  J Tognarelli; S Ulloa; E Villagra; J Lagos; C Aguayo; R Fasce; B Parra; J Mora; N Becerra; N Lagos; L Vera; B Olivares; M Vilches; J Fernández
Journal:  Arch Virol       Date:  2015-11-26       Impact factor: 2.574

Review 5.  Zika Virus: Diagnostics for an Emerging Pandemic Threat.

Authors:  Jesse J Waggoner; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2016-02-17       Impact factor: 5.948

6.  Interim Guidance for Interpretation of Zika Virus Antibody Test Results.

Authors:  Ingrid B Rabe; J Erin Staples; Julie Villanueva; Kimberly B Hummel; Jeffrey A Johnson; Laura Rose; Susan Hills; Annemarie Wasley; Marc Fischer; Ann M Powers
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2016-06-03       Impact factor: 17.586

7.  Zika virus, French polynesia, South pacific, 2013.

Authors:  Van-Mai Cao-Lormeau; Claudine Roche; Anita Teissier; Emilie Robin; Anne-Laure Berry; Henri-Pierre Mallet; Amadou Alpha Sall; Didier Musso
Journal:  Emerg Infect Dis       Date:  2014-06       Impact factor: 6.883

8.  Multiplex real-time RT-PCR for detecting chikungunya virus and dengue virus.

Authors:  Piyathida Pongsiri; Kesmanee Praianantathavorn; Apiradee Theamboonlers; Sunchai Payungporn; Yong Poovorawan
Journal:  Asian Pac J Trop Med       Date:  2012-05       Impact factor: 1.226

9.  Isolation of Infective Zika Virus from Urine and Saliva of Patients in Brazil.

Authors:  Myrna C Bonaldo; Ieda P Ribeiro; Noemia S Lima; Alexandre A C Dos Santos; Lidiane S R Menezes; Stephanie O D da Cruz; Iasmim S de Mello; Nathália D Furtado; Elaine E de Moura; Luana Damasceno; Kely A B da Silva; Marcia G de Castro; Alexandra L Gerber; Luiz G P de Almeida; Ricardo Lourenço-de-Oliveira; Ana Tereza R Vasconcelos; Patrícia Brasil
Journal:  PLoS Negl Trop Dis       Date:  2016-06-24

10.  Single-Reaction Multiplex Reverse Transcription PCR for Detection of Zika, Chikungunya, and Dengue Viruses.

Authors:  Jesse J Waggoner; Lionel Gresh; Alisha Mohamed-Hadley; Gabriela Ballesteros; Maria Jose Vargas Davila; Yolanda Tellez; Malaya K Sahoo; Angel Balmaseda; Eva Harris; Benjamin A Pinsky
Journal:  Emerg Infect Dis       Date:  2016-07-15       Impact factor: 6.883

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  11 in total

Review 1.  Diagnosis of Zika Virus Infections: Challenges and Opportunities.

Authors:  Jorge L Munoz-Jordan
Journal:  J Infect Dis       Date:  2017-12-16       Impact factor: 5.226

2.  Diagnostic Validation of the RealStar® Zika Virus Reverse Transcription Polymerase Chain Reaction Kit for Detection of Zika Virus RNA in Urine and Serum Specimens.

Authors:  Stephan Ölschläger; Antoine Enfissi; Mareen Zaruba; Mirdad Kazanji; Dominique Rousset
Journal:  Am J Trop Med Hyg       Date:  2017-07-19       Impact factor: 2.345

3.  Evaluation of Euroimmun Anti-Zika Virus IgM and IgG Enzyme-Linked Immunosorbent Assays for Zika Virus Serologic Testing.

Authors:  Arnaud G L'Huillier; Anne Hamid-Allie; Erik Kristjanson; Louis Papageorgiou; Sam Hung; Chun Fai Wong; Derek R Stein; Romy Olsha; Lee W Goneau; Kristina Dimitrova; Mike Drebot; David Safronetz; Jonathan B Gubbay
Journal:  J Clin Microbiol       Date:  2017-05-31       Impact factor: 5.948

Review 4.  Diagnostic Testing for Zika Virus: a Postoutbreak Update.

Authors:  Elitza S Theel; D Jane Hata
Journal:  J Clin Microbiol       Date:  2018-03-26       Impact factor: 5.948

5.  Co-circulation and simultaneous co-infection of dengue, chikungunya, and zika viruses in patients with febrile syndrome at the Colombian-Venezuelan border.

Authors:  Marlen Yelitza Carrillo-Hernández; Julian Ruiz-Saenz; Lucy Jaimes Villamizar; Sergio Yebrail Gómez-Rangel; Marlen Martínez-Gutierrez
Journal:  BMC Infect Dis       Date:  2018-01-30       Impact factor: 3.090

Review 6.  Advances in Diagnosis, Surveillance, and Monitoring of Zika Virus: An Update.

Authors:  Raj K Singh; Kuldeep Dhama; Kumaragurubaran Karthik; Ruchi Tiwari; Rekha Khandia; Ashok Munjal; Hafiz M N Iqbal; Yashpal S Malik; Rubén Bueno-Marí
Journal:  Front Microbiol       Date:  2018-01-19       Impact factor: 5.640

7.  Comparative Evaluation of Indirect Immunofluorescence and NS-1-Based ELISA to Determine Zika Virus-Specific IgM.

Authors:  Fernando De Ory; María Paz Sánchez-Seco; Ana Vázquez; María Dolores Montero; Elena Sulleiro; Miguel J Martínez; Lurdes Matas; Francisco J Merino
Journal:  Viruses       Date:  2018-07-19       Impact factor: 5.048

8.  Performance of 2 Commercial Serologic Tests for Diagnosing Zika Virus Infection.

Authors:  Séverine Matheus; Cheikh Talla; Bhety Labeau; Franck de Laval; Sébastien Briolant; Lena Berthelot; Muriel Vray; Dominique Rousset
Journal:  Emerg Infect Dis       Date:  2019-06       Impact factor: 6.883

9.  Presence of Flavivirus Antibodies Does Not Lead to a Greater Number of Symptoms in a Small Cohort of Canadian Travelers Infected with Zika Virus.

Authors:  Robert A Kozak; Lee W Goneau; Cedric DeLima; Olivia Varsaneux; AliReza Eshaghi; Erik Kristjanson; Romy Olsha; David Safronetz; Stephen Perusini; Christine Frantz; Jonathan B Gubbay
Journal:  Viruses       Date:  2020-01-24       Impact factor: 5.048

10.  Performance of the Trioplex real-time RT-PCR assay for detection of Zika, dengue, and chikungunya viruses.

Authors:  Gilberto A Santiago; Jesús Vázquez; Sean Courtney; Katia Y Matías; Lauren E Andersen; Candimar Colón; Angela E Butler; Rebecca Roulo; John Bowzard; Julie M Villanueva; Jorge L Muñoz-Jordan
Journal:  Nat Commun       Date:  2018-04-11       Impact factor: 14.919

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