Literature DB >> 28297670

LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation.

Longfei Wang1, Yunsun Nam1, Anna K Lee1, Chunxiao Yu1, Kira Roth1, Casandra Chen1, Elizabeth M Ransey1, Piotr Sliz2.   

Abstract

LIN28 is an RNA binding protein that plays crucial roles in pluripotency, glucose metabolism, tissue regeneration, and tumorigenesis. LIN28 binds to the let-7 primary and precursor microRNAs through bipartite recognition and induces degradation of let-7 precursors (pre-let-7) by promoting oligouridylation by terminal uridylyltransferases (TUTases). Here, we report that the zinc knuckle domain (ZKD) of mouse LIN28 recruits TUT4 to initiate the oligouridylation of let-7 precursors. Our crystal structure of human LIN28 in complex with a fragment of pre-let-7f-1 determined to 2.0 Å resolution shows that the interaction between ZKD and RNA is constrained to a small cavity with a high druggability score. We demonstrate that the specific interaction between ZKD and pre-let-7 is necessary and sufficient to induce oligouridylation by recruiting the N-terminal fragment of TUT4 (NTUT4) and the formation of a stable ZKD:NTUT4:pre-let-7 ternary complex is crucial for the acquired processivity of TUT4.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  LIN28; LIN28A; RNA binding protein; RNA degradation; TUT4; TUTase; X-ray structure; Zcchc11; let-7; oligouridylation

Mesh:

Substances:

Year:  2017        PMID: 28297670     DOI: 10.1016/j.celrep.2017.02.044

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  24 in total

Review 1.  The role of 3' end uridylation in RNA metabolism and cellular physiology.

Authors:  Dagmar Zigáčková; Štěpánka Vaňáčová
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

2.  LIN28 Selectively Modulates a Subclass of Let-7 MicroRNAs.

Authors:  Dmytro Ustianenko; Hua-Sheng Chiu; Thomas Treiber; Sebastien M Weyn-Vanhentenryck; Nora Treiber; Gunter Meister; Pavel Sumazin; Chaolin Zhang
Journal:  Mol Cell       Date:  2018-07-19       Impact factor: 17.970

Review 3.  LIN28 Family in Testis: Control of Cell Renewal, Maturation, Fertility and Aging.

Authors:  Dajana Krsnik; Tihana Marić; Floriana Bulić-Jakuš; Nino Sinčić; Ana Katušić Bojanac
Journal:  Int J Mol Sci       Date:  2022-06-29       Impact factor: 6.208

Review 4.  Regulation of microRNA biogenesis and its crosstalk with other cellular pathways.

Authors:  Thomas Treiber; Nora Treiber; Gunter Meister
Journal:  Nat Rev Mol Cell Biol       Date:  2019-01       Impact factor: 94.444

5.  Comparative analysis of LIN28-RNA binding sites identified at single nucleotide resolution.

Authors:  Elizabeth Ransey; Anders Björkbom; Victor S Lelyveld; Przemyslaw Biecek; Lorena Pantano; Jack W Szostak; Piotr Sliz
Journal:  RNA Biol       Date:  2017-10-09       Impact factor: 4.652

Review 6.  3' RNA Uridylation in Epitranscriptomics, Gene Regulation, and Disease.

Authors:  Miriam R Menezes; Julien Balzeau; John P Hagan
Journal:  Front Mol Biosci       Date:  2018-07-13

Review 7.  Terminal nucleotidyl transferases (TENTs) in mammalian RNA metabolism.

Authors:  Zbigniew Warkocki; Vladyslava Liudkovska; Olga Gewartowska; Seweryn Mroczek; Andrzej Dziembowski
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

8.  Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis.

Authors:  Christopher R Faehnle; Jack Walleshauser; Leemor Joshua-Tor
Journal:  Nat Struct Mol Biol       Date:  2017-07-03       Impact factor: 15.369

9.  Expansion of cat-ELCCA for the Discovery of Small Molecule Inhibitors of the Pre-let-7-Lin28 RNA-Protein Interaction.

Authors:  Daniel A Lorenz; Tanpreet Kaur; Samuel A Kerk; Erin E Gallagher; Jorge Sandoval; Amanda L Garner
Journal:  ACS Med Chem Lett       Date:  2018-05-16       Impact factor: 4.345

10.  SUMOylation modulates the LIN28A-let-7 signaling pathway in response to cellular stresses in cancer cells.

Authors:  Jinzhuo Dou; Hailong Zhang; Ran Chen; Zimei Shu; Haihua Yuan; Xian Zhao; Yanli Wang; Jian Huang; Aiwu Zhou; Jianxiu Yu
Journal:  Mol Oncol       Date:  2020-06-01       Impact factor: 6.603

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