Literature DB >> 28292839

The physics of organoids: a biophysical approach to understanding organogenesis.

Svend Dahl-Jensen1,2, Anne Grapin-Botton1.   

Abstract

Organoids representing a diversity of tissues have recently been created, bridging the gap between cell culture and experiments performed in vivo Being small and amenable to continuous monitoring, they offer the opportunity to scrutinize the dynamics of organ development, including the exciting prospect of observing aspects of human embryo development live. From a physicist's perspective, their ability to self-organize - to differentiate and organize cells in space - calls for the identification of the simple rules that underlie this capacity. Organoids provide tractable conditions to investigate the effects of the growth environment, including its molecular composition and mechanical properties, along with the initial conditions such as cell number and type(s). From a theoretical standpoint, different types of in silico modeling can complement the measurements performed in organoids to understand the role of chemical diffusion, contact signaling, differential cell adhesion and mechanical controls. Here, we discuss what it means to take a biophysical approach to understanding organogenesis in vitro and how we might expect such approaches to develop in the future.
© 2017. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Biophysics; Modeling; Organogenesis; Organoids; Stem cells

Mesh:

Year:  2017        PMID: 28292839     DOI: 10.1242/dev.143693

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  17 in total

1.  Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution.

Authors:  Cameron S Cowan; Magdalena Renner; Martina De Gennaro; Brigitte Gross-Scherf; David Goldblum; Yanyan Hou; Martin Munz; Tiago M Rodrigues; Jacek Krol; Tamas Szikra; Rachel Cuttat; Annick Waldt; Panagiotis Papasaikas; Roland Diggelmann; Claudia P Patino-Alvarez; Patricia Galliker; Stefan E Spirig; Dinko Pavlinic; Nadine Gerber-Hollbach; Sven Schuierer; Aldin Srdanovic; Marton Balogh; Riccardo Panero; Akos Kusnyerik; Arnold Szabo; Michael B Stadler; Selim Orgül; Simone Picelli; Pascal W Hasler; Andreas Hierlemann; Hendrik P N Scholl; Guglielmo Roma; Florian Nigsch; Botond Roska
Journal:  Cell       Date:  2020-09-17       Impact factor: 41.582

Review 2.  Modelling the endocrine pancreas in health and disease.

Authors:  Mostafa Bakhti; Anika Böttcher; Heiko Lickert
Journal:  Nat Rev Endocrinol       Date:  2019-03       Impact factor: 43.330

3.  Hydraulic and electric control of cell spheroids.

Authors:  Charlie Duclut; Jacques Prost; Frank Jülicher
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-11       Impact factor: 11.205

Review 4.  Mathematical Models of Organoid Cultures.

Authors:  Sandra Montes-Olivas; Lucia Marucci; Martin Homer
Journal:  Front Genet       Date:  2019-09-19       Impact factor: 4.599

5.  Organotypic tumor slice cultures provide a versatile platform for immuno-oncology and drug discovery.

Authors:  Ramya Sivakumar; Marina Chan; Jiye Stella Shin; Nao Nishida-Aoki; Heidi L Kenerson; Olivier Elemento; Himisha Beltran; Raymond Yeung; Taranjit S Gujral
Journal:  Oncoimmunology       Date:  2019-10-10       Impact factor: 8.110

6.  Three-Dimensional Explant Platform for Studies on Choroid Plexus Epithelium.

Authors:  Natalia Petersen; Lola Torz; Kristian H Reveles Jensen; Gertrud Malene Hjortø; Katja Spiess; Mette Marie Rosenkilde
Journal:  Front Cell Neurosci       Date:  2020-05-05       Impact factor: 5.505

7.  Cell fate coordinates mechano-osmotic forces in intestinal crypt formation.

Authors:  Qiutan Yang; Shi-Lei Xue; Chii Jou Chan; Markus Rempfler; Dario Vischi; Francisca Maurer-Gutierrez; Takashi Hiiragi; Edouard Hannezo; Prisca Liberali
Journal:  Nat Cell Biol       Date:  2021-06-21       Impact factor: 28.824

8.  Loss of RAD9B impairs early neural development and contributes to the risk for human spina bifida.

Authors:  Xuanye Cao; Tian Tian; John W Steele; Robert M Cabrera; Vanessa Aguiar-Pulido; Shruti Wadhwa; Nikitha Bhavani; Patrick Bi; Nick H Gargurevich; Ethan N Hoffman; Chun-Quan Cai; Nicholas J Marini; Wei Yang; Gary M Shaw; Margaret E Ross; Richard H Finnell; Yunping Lei
Journal:  Hum Mutat       Date:  2020-01-16       Impact factor: 4.700

9.  Defining Lineage Potential and Fate Behavior of Precursors during Pancreas Development.

Authors:  Magdalena K Sznurkowska; Edouard Hannezo; Roberta Azzarelli; Steffen Rulands; Sonia Nestorowa; Christopher J Hindley; Jennifer Nichols; Berthold Göttgens; Meritxell Huch; Anna Philpott; Benjamin D Simons
Journal:  Dev Cell       Date:  2018-07-26       Impact factor: 12.270

Review 10.  Intestinal Morphogenesis in Development, Regeneration, and Disease: The Potential Utility of Intestinal Organoids for Studying Compartmentalization of the Crypt-Villus Structure.

Authors:  Ohman Kwon; Tae-Su Han; Mi-Young Son
Journal:  Front Cell Dev Biol       Date:  2020-10-23
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