Literature DB >> 28286003

Recognition of Histone H3K14 Acylation by MORF.

Brianna J Klein1, Johayra Simithy2, Xiaolu Wang3, JaeWoo Ahn1, Forest H Andrews1, Yi Zhang1, Jacques Côté4, Xiaobing Shi3, Benjamin A Garcia5, Tatiana G Kutateladze6.   

Abstract

The monocytic leukemia zinc-finger protein-related factor (MORF) is a transcriptional coactivator and a catalytic subunit of the lysine acetyltransferase complex implicated in cancer and developmental diseases. We have previously shown that the double plant homeodomain finger (DPF) of MORF is capable of binding to acetylated histone H3. Here we demonstrate that the DPF of MORF recognizes many newly identified acylation marks. The mass spectrometry study provides comprehensive analysis of H3K14 acylation states in vitro and in vivo. The crystal structure of the MORF DPF-H3K14butyryl complex offers insight into the selectivity of this reader toward lipophilic acyllysine substrates. Together, our findings support the mechanism by which the acetyltransferase MORF promotes spreading of histone acylation.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DPF; MORF; PTM; double PHD finger; epigenetic; histone binding; lysine acylation

Mesh:

Substances:

Year:  2017        PMID: 28286003      PMCID: PMC5415407          DOI: 10.1016/j.str.2017.02.003

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  31 in total

1.  Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain.

Authors:  Yuanyuan Li; Benjamin R Sabari; Tatyana Panchenko; Hong Wen; Dan Zhao; Haipeng Guan; Liling Wan; He Huang; Zhanyun Tang; Yingming Zhao; Robert G Roeder; Xiaobing Shi; C David Allis; Haitao Li
Journal:  Mol Cell       Date:  2016-04-21       Impact factor: 17.970

Review 2.  50 years of protein acetylation: from gene regulation to epigenetics, metabolism and beyond.

Authors:  Eric Verdin; Melanie Ott
Journal:  Nat Rev Mol Cell Biol       Date:  2014-12-30       Impact factor: 94.444

3.  EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra.

Authors:  Zuo-Fei Yuan; Shu Lin; Rosalynn C Molden; Xing-Jun Cao; Natarajan V Bhanu; Xiaoshi Wang; Simone Sidoli; Shichong Liu; Benjamin A Garcia
Journal:  Mol Cell Proteomics       Date:  2015-03-24       Impact factor: 5.911

Review 4.  MOZ and MORF acetyltransferases: Molecular interaction, animal development and human disease.

Authors:  Xiang-Jiao Yang
Journal:  Biochim Biophys Acta       Date:  2015-04-25

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Mechanism and regulation of acetylated histone binding by the tandem PHD finger of DPF3b.

Authors:  Lei Zeng; Qiang Zhang; Side Li; Alexander N Plotnikov; Martin J Walsh; Ming-Ming Zhou
Journal:  Nature       Date:  2010-07-08       Impact factor: 49.962

7.  YEATS2 is a selective histone crotonylation reader.

Authors:  Dan Zhao; Haipeng Guan; Shuai Zhao; Wenyi Mi; Hong Wen; Yuanyuan Li; Yingming Zhao; C David Allis; Xiaobing Shi; Haitao Li
Journal:  Cell Res       Date:  2016-04-22       Impact factor: 25.617

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

9.  The double PHD finger domain of MOZ/MYST3 induces α-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification.

Authors:  Ingrid Dreveny; Sian E Deeves; Joel Fulton; Baigong Yue; Marie Messmer; Amit Bhattacharya; Hilary M Collins; David M Heery
Journal:  Nucleic Acids Res       Date:  2013-10-22       Impact factor: 16.971

10.  Complete Workflow for Analysis of Histone Post-translational Modifications Using Bottom-up Mass Spectrometry: From Histone Extraction to Data Analysis.

Authors:  Simone Sidoli; Natarajan V Bhanu; Kelly R Karch; Xiaoshi Wang; Benjamin A Garcia
Journal:  J Vis Exp       Date:  2016-05-17       Impact factor: 1.355

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  20 in total

1.  Characteristics of a PHD Finger Subtype.

Authors:  Daniel Boamah; Tao Lin; Franchesca A Poppinga; Shraddha Basu; Shahariar Rahman; Francisca Essel; Suvobrata Chakravarty
Journal:  Biochemistry       Date:  2018-01-05       Impact factor: 3.162

2.  Revealing the protein propionylation activity of the histone acetyltransferase MOF (males absent on the first).

Authors:  Zhen Han; Hong Wu; Sunjoo Kim; Xiangkun Yang; Qianjin Li; He Huang; Houjian Cai; Michael G Bartlett; Aiping Dong; Hong Zeng; Peter J Brown; Xiang-Jiao Yang; Cheryl H Arrowsmith; Yingming Zhao; Y George Zheng
Journal:  J Biol Chem       Date:  2018-01-10       Impact factor: 5.157

3.  Expanding the Reader Landscape of Histone Acylation.

Authors:  Abid Khan; Joseph B Bridgers; Brian D Strahl
Journal:  Structure       Date:  2017-04-04       Impact factor: 5.006

Review 4.  Integration of Epigenetic Mechanisms into Non-Genotoxic Carcinogenicity Hazard Assessment: Focus on DNA Methylation and Histone Modifications.

Authors:  Daniel Desaulniers; Paule Vasseur; Abigail Jacobs; M Cecilia Aguila; Norman Ertych; Miriam N Jacobs
Journal:  Int J Mol Sci       Date:  2021-10-11       Impact factor: 5.923

Review 5.  Domain cross-talk in regulation of histone modifications: Molecular mechanisms and targeting opportunities.

Authors:  James E Longbotham; Meng Yao Zhang; Danica Galonić Fujimori
Journal:  Curr Opin Chem Biol       Date:  2020-08-03       Impact factor: 8.822

Review 6.  Old cogs, new tricks: the evolution of gene expression in a chromatin context.

Authors:  Paul B Talbert; Michael P Meers; Steven Henikoff
Journal:  Nat Rev Genet       Date:  2019-05       Impact factor: 53.242

Review 7.  Mechanistic similarities in recognition of histone tails and DNA by epigenetic readers.

Authors:  Kendra R Vann; Brianna J Klein; Tatiana G Kutateladze
Journal:  Curr Opin Struct Biol       Date:  2021-05-13       Impact factor: 6.809

8.  H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.

Authors:  Renata Z Jurkowska; Su Qin; Goran Kungulovski; Wolfram Tempel; Yanli Liu; Pavel Bashtrykov; Judith Stiefelmaier; Tomasz P Jurkowski; Srikanth Kudithipudi; Sara Weirich; Raluca Tamas; Hong Wu; Ludmila Dombrovski; Peter Loppnau; Richard Reinhardt; Jinrong Min; Albert Jeltsch
Journal:  Nat Commun       Date:  2017-12-12       Impact factor: 14.919

9.  Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.

Authors:  Alessio Bortoluzzi; Anastasia Amato; Xavier Lucas; Manuel Blank; Alessio Ciulli
Journal:  Biochem J       Date:  2017-05-04       Impact factor: 3.857

10.  Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A.

Authors:  James E Longbotham; Mark J S Kelly; Danica Galonić Fujimori
Journal:  ACS Chem Biol       Date:  2021-02-23       Impact factor: 4.634

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