Literature DB >> 28285413

Comprehensive assessment of the genes involved in withanolide biosynthesis from Withania somnifera: chemotype-specific and elicitor-responsive expression.

Aditya Vikram Agarwal1,2, Parul Gupta1,3, Deeksha Singh1,4, Yogeshwar Vikram Dhar1,4, Deepak Chandra2, Prabodh Kumar Trivedi5,6.   

Abstract

Withania somnifera (L.) Dunal (Family, Solanaceae), is among the most valuable medicinal plants used in Ayurveda owing to its rich reservoir of pharmaceutically active secondary metabolites known as withanolides. Withanolides are C28-steroidal lactones having a triterpenoidal metabolic origin synthesised via mevalonate (MVA) pathway and methyl-D-erythritol-4-phosphate (MEP) pathway involving metabolic intermediacy of 24-methylene (C30-terpenoid) cholesterol. Phytochemical studies suggest differences in the content and/or nature of withanolides in different tissues of different chemotypes. Though development of genomic resources has provided information about putative genes encoding enzymes for biosynthesis of intermediate steps of terpenoid backbone, not much is known about their regulation and response to elicitation. In this study, we generated detailed molecular information about genes catalysing key regulatory steps of withanolide biosynthetic pathway. The full-length sequences of genes encoding enzymes for intermediate steps of terpenoid backbone biosynthesis and their paralogs have been characterized for their functional and structural properties as well as phylogeny using bioinformatics approach. The expression analysis suggests that these genes are differentially expressed in different tissues (with maximal expression in young leaf), chemotypes and in response to salicylic acid (SA) and methyl jasmonate (MJ) treatments. Sub-cellular localization studies suggest that both paralogs of sterol ∆-7 reductase (WsDWF5-1 and WsDWF5-2) are localized in the endoplasmic reticulum (ER) thus supporting their indispensible role in withanolide biosynthesis. Comprehensive information developed, in this study, will lead to elucidation of chemotype- as well as tissue-specific withanolide biosynthesis and development of new tools for functional genomics in this important medicinal plant.

Entities:  

Keywords:  Chemotypes; Elicitor response; Sub-cellular localization; Triterpenoid biosynthetic pathway; Withania somnifera; Withanolides

Mesh:

Substances:

Year:  2017        PMID: 28285413     DOI: 10.1007/s10142-017-0548-x

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  35 in total

1.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

2.  Comprehensive metabolic fingerprinting of Withania somnifera leaf and root extracts.

Authors:  Sandipan Chatterjee; Shatakshi Srivastava; Asna Khalid; Niharika Singh; Rajender Singh Sangwan; Om Prakash Sidhu; Raja Roy; C L Khetrapal; Rakesh Tuli
Journal:  Phytochemistry       Date:  2010-05-17       Impact factor: 4.072

Review 3.  Natural withanolides: an overview.

Authors:  Li-Xia Chen; Hao He; Feng Qiu
Journal:  Nat Prod Rep       Date:  2011-02-23       Impact factor: 13.423

4.  Virus-induced gene silencing of Withania somnifera squalene synthase negatively regulates sterol and defence-related genes resulting in reduced withanolides and biotic stress tolerance.

Authors:  Anup Kumar Singh; Varun Dwivedi; Avanish Rai; Shaifali Pal; Sajjalavarahalli Gangireddy Eswara Reddy; Dodaghatta Krishnarao Venkata Rao; Ajit Kumar Shasany; Dinesh A Nagegowda
Journal:  Plant Biotechnol J       Date:  2015-03-24       Impact factor: 9.803

5.  Cloning and characterization of 2-C-methyl-D-erythritol-4-phosphate pathway genes for isoprenoid biosynthesis from Indian ginseng, Withania somnifera.

Authors:  Parul Gupta; Aditya Vikram Agarwal; Nehal Akhtar; Rajender Singh Sangwan; Surya Pratap Singh; Prabodh Kumar Trivedi
Journal:  Protoplasma       Date:  2012-04-15       Impact factor: 3.356

6.  Constitutive expression of Arabidopsis MYB transcription factor, AtMYB11, in tobacco modulates flavonoid biosynthesis in favor of flavonol accumulation.

Authors:  Ashutosh Pandey; Prashant Misra; Prabodh Kumar Trivedi
Journal:  Plant Cell Rep       Date:  2015-05-16       Impact factor: 4.570

7.  Structure prediction and functional characterization of secondary metabolite proteins of Ocimum.

Authors:  Sudeep Roy; Nidhi Maheshwari; Rashi Chauhan; Naresh Kumar Sen; Ashok Sharma
Journal:  Bioinformation       Date:  2011-07-06

8.  Expression of Arabidopsis MYB transcription factor, AtMYB111, in tobacco requires light to modulate flavonol content.

Authors:  Ashutosh Pandey; Prashant Misra; Sweta Bhambhani; Chitra Bhatia; Prabodh Kumar Trivedi
Journal:  Sci Rep       Date:  2014-05-21       Impact factor: 4.379

9.  Expression of GhNAC2 from G. herbaceum, improves root growth and imparts tolerance to drought in transgenic cotton and Arabidopsis.

Authors:  Samatha Gunapati; Ram Naresh; Sanjay Ranjan; Deepti Nigam; Aradhana Hans; Praveen C Verma; Rekha Gadre; Uday V Pathre; Aniruddha P Sane; Vidhu A Sane
Journal:  Sci Rep       Date:  2016-04-26       Impact factor: 4.379

Review 10.  A Decade of Molecular Understanding of Withanolide Biosynthesis and In vitro Studies in Withania somnifera (L.) Dunal: Prospects and Perspectives for Pathway Engineering.

Authors:  Niha Dhar; Sumeer Razdan; Satiander Rana; Wajid W Bhat; Ram Vishwakarma; Surrinder K Lattoo
Journal:  Front Plant Sci       Date:  2015-11-27       Impact factor: 5.753

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  5 in total

1.  Candidate genes of flavonoid biosynthesis in Selaginella bryopteris (L.) Baker identified by RNA-Seq.

Authors:  Ravi S Singh; Ravi Kesari; Ujjwal Kumar; Vikash Kumar Jha; Anjani Kumar; Tribhuwan Kumar; Awadhesh K Pal; Prabhash K Singh
Journal:  Funct Integr Genomics       Date:  2018-04-18       Impact factor: 3.410

2.  Foliar application of elicitors enhanced the yield of withanolide contents in Withania somnifera (L.) Dunal (variety, Poshita).

Authors:  Manali Singh; Nitesh Kumar Poddar; Dipti Singh; Sanjeev Agrawal
Journal:  3 Biotech       Date:  2020-03-04       Impact factor: 2.406

3.  3'O-Methyltransferase, Ps3'OMT, from opium poppy: involvement in papaverine biosynthesis.

Authors:  Parul Agarwal; Sumya Pathak; Ravi Shankar Kumar; Yogeshwar Vikram Dhar; Ashutosh Pandey; Sudhir Shukla; Prabodh Kumar Trivedi
Journal:  Plant Cell Rep       Date:  2019-06-12       Impact factor: 4.570

4.  Molecular cloning and expression analysis of two key genes, HDS and HDR, in the MEP pathway in Pyropia haitanensis.

Authors:  Yuan He; Zhihong Yan; Yu Du; Yafeng Ma; Songdong Shen
Journal:  Sci Rep       Date:  2017-12-13       Impact factor: 4.379

5.  Molecular characterization of three CYP450 genes reveals their role in withanolides formation and defense in Withania somnifera, the Indian Ginseng.

Authors:  H B Shilpashree; S J Sudharshan; Ajit K Shasany; Dinesh A Nagegowda
Journal:  Sci Rep       Date:  2022-01-31       Impact factor: 4.379

  5 in total

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