Literature DB >> 2828220

Organization and genomic distribution of "82H" alpha satellite DNA. Evidence for a low-copy or single-copy alphoid domain located on human chromosome 14.

J S Waye1, A R Mitchell, H F Willard.   

Abstract

We have investigated the organization and genomic distribution of sequences homologous to p82H, a cloned human alpha satellite sequence purported, based on previous in situ hybridization experiments, to exist at the centromere of each human chromosome. We report here that, using Southern blotting analysis under conditions of high stringency, p82H hybridizes solely to a low-copy or single-copy alphoid domain located at or near the centromeric region of human chromosome 14. In contrast, conditions of reduced hybridization stringency permit extensive cross-hybridization with non-identical, chromosome-specific alpha satellite subsets found elsewhere in the human genome. Thus, the previously described ubiquity of "82H" human centromeric sequences reflects the existence of diverse alpha satellite subsets located at the centromeric region of each human chromosome.

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Year:  1988        PMID: 2828220     DOI: 10.1007/BF00291229

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  25 in total

1.  Chromosome-specific subsets of human alpha satellite DNA: analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat.

Authors:  H F Willard; J S Waye
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

2.  Chromosome-specific alpha satellite DNA: nucleotide sequence analysis of the 2.0 kilobasepair repeat from the human X chromosome.

Authors:  J S Waye; H F Willard
Journal:  Nucleic Acids Res       Date:  1985-04-25       Impact factor: 16.971

3.  Organization and evolution of alpha satellite DNA from human chromosome 11.

Authors:  J S Waye; L A Creeper; H F Willard
Journal:  Chromosoma       Date:  1987       Impact factor: 4.316

4.  Sequence heterogeneity within the human alphoid repetitive DNA family.

Authors:  P Devilee; P Slagboom; C J Cornelisse; P L Pearson
Journal:  Nucleic Acids Res       Date:  1986-03-11       Impact factor: 16.971

5.  Characterization of a cloned repetitive DNA sequence concentrated on the human X chromosome.

Authors:  T P Yang; S K Hansen; K K Oishi; O A Ryder; B A Hamkalo
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

6.  A sensitive and dependable assay for distinguishing hamster and human X-linked steroid sulfatase activity in somatic cell hybrids.

Authors:  H F Willard; M T Holmes
Journal:  Hum Genet       Date:  1984       Impact factor: 4.132

7.  Characterization of a cloned DNA sequence that is present at centromeres of all human autosomes and the X chromosome and shows polymorphic variation.

Authors:  E W Jabs; S F Wolf; B R Migeon
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

Review 8.  Heterochromatin and satellite DNA in man: properties and prospects.

Authors:  G L Miklos; B John
Journal:  Am J Hum Genet       Date:  1979-05       Impact factor: 11.025

9.  Breakpoints in the human T-cell antigen receptor alpha-chain locus in two T-cell leukaemia patients with chromosomal translocations.

Authors:  W H Lewis; E E Michalopoulos; D L Williams; M D Minden; T W Mak
Journal:  Nature       Date:  1985 Oct 10-16       Impact factor: 49.962

10.  Molecular evidence for genetic exchanges among ribosomal genes on nonhomologous chromosomes in man and apes.

Authors:  N Arnheim; M Krystal; R Schmickel; G Wilson; O Ryder; E Zimmer
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

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  17 in total

1.  Deletion of specific sequences or modification of centromeric chromatin are responsible for Y chromosome centromere inactivation.

Authors:  P Maraschio; O Zuffardi; A Caiulo; E Dainotti; M Piantanida; H Rivera; R Tupler
Journal:  Hum Genet       Date:  1990-10       Impact factor: 4.132

2.  A homologous subfamily of satellite III DNA on human chromosomes 14 and 22.

Authors:  K H Choo; E Earle; C McQuillan
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

3.  Partial deletion of alpha satellite DNA associated with reduced amounts of the centromere protein CENP-B in a mitotically stable human chromosome rearrangement.

Authors:  R Wevrick; W C Earnshaw; P N Howard-Peebles; H F Willard
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

4.  Four distinct alpha satellite subfamilies shared by human chromosomes 13, 14 and 21.

Authors:  B Vissel; K H Choo
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

5.  Evidence for an ancestral alphoid domain on the long arm of human chromosome 2.

Authors:  R Avarello; A Pedicini; A Caiulo; O Zuffardi; M Fraccaro
Journal:  Hum Genet       Date:  1992-05       Impact factor: 4.132

6.  Comparative mapping of a gorilla-derived alpha satellite DNA clone on great ape and human chromosomes.

Authors:  A Baldini; D A Miller; V Shridhar; M Rocchi; O J Miller; D C Ward
Journal:  Chromosoma       Date:  1991-11       Impact factor: 4.316

7.  Consensus higher order repeats and frequency of string distributions in human genome.

Authors:  Vladimir Paar; Ivan Basar; Marija Rosandić; Matko Gluncić
Journal:  Curr Genomics       Date:  2007-04       Impact factor: 2.236

Review 8.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

9.  Concerted evolution of alpha satellite DNA: evidence for species specificity and a general lack of sequence conservation among alphoid sequences of higher primates.

Authors:  J S Waye; H F Willard
Journal:  Chromosoma       Date:  1989-10       Impact factor: 4.316

10.  Types, stability, and phenotypic consequences of chromosome rearrangements leading to interstitial telomeric sequences.

Authors:  E Rossi; G Floridia; M Casali; C Danesino; G Chiumello; F Bernardi; I Magnani; L Papi; M Mura; O Zuffardi
Journal:  J Med Genet       Date:  1993-11       Impact factor: 6.318

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