Literature DB >> 28280239

NMR insight into myosin-binding subunit coiled-coil structure reveals binding interface with protein kinase G-Iα leucine zipper in vascular function.

Alok K Sharma1,2, Gabriel Birrane2,3, Clemens Anklin4, Alan C Rigby5, Seth L Alper6,2.   

Abstract

Nitrovasodilators relax vascular smooth-muscle cells in part by modulating the interaction of the C-terminal coiled-coil domain (CC) and/or the leucine zipper (LZ) domain of the myosin light-chain phosphatase component, myosin-binding subunit (MBS), with the N-terminal LZ domain of protein kinase G (PKG)-Iα. Despite the importance of vasodilation in cardiovascular homeostasis and therapy, our structural understanding of the MBS CC interaction with LZ PKG-1α has remained limited. Here, we report the 3D NMR solution structure of homodimeric CC MBS in which amino acids 932-967 form a coiled-coil of two monomeric α-helices in parallel orientation. We found that the structure is stabilized by non-covalent interactions, with dominant contributions from hydrophobic residues at a and d heptad positions. Using NMR chemical-shift perturbation (CSP) analysis, we identified a subset of hydrophobic and charged residues of CC MBS (localized within and adjacent to the C-terminal region) contributing to the dimer-dimer interaction interface between homodimeric CC MBS and homodimeric LZ PKG-Iα. 15N backbone relaxation NMR revealed the dynamic features of the CC MBS interface residues identified by NMR CSP. Paramagnetic relaxation enhancement- and CSP-NMR-guided HADDOCK modeling of the dimer-dimer interface of the heterotetrameric complex exhibits the involvement of non-covalent intermolecular interactions that are localized within and adjacent to the C-terminal regions of each homodimer. These results deepen our understanding of the binding restraints of this CC MBS·LZ PKG-Iα low-affinity heterotetrameric complex and allow reevaluation of the role(s) of myosin light-chain phosphatase partner polypeptides in regulation of vascular smooth-muscle cell contractility.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  coiled-coil; heterotetrameric dimer of dimers; molecular docking; molecular dynamics simulations; myosin; nuclear magnetic resonance (NMR); paramagnetic relaxation enhancement; protein kinase G (PKG); vascular smooth-muscle cells

Mesh:

Substances:

Year:  2017        PMID: 28280239      PMCID: PMC5409472          DOI: 10.1074/jbc.M117.781260

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  47 in total

1.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

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4.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

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Journal:  J Mol Biol       Date:  1997-10-17       Impact factor: 5.469

5.  Structures of cGMP-Dependent Protein Kinase (PKG) Iα Leucine Zippers Reveal an Interchain Disulfide Bond Important for Dimer Stability.

Authors:  Liying Qin; Albert S Reger; Elaine Guo; Matthew P Yang; Peter Zwart; Darren E Casteel; Choel Kim
Journal:  Biochemistry       Date:  2015-07-15       Impact factor: 3.162

6.  Backbone dynamics of TEM-1 determined by NMR: evidence for a highly ordered protein.

Authors:  Pierre-Yves Savard; Stéphane M Gagné
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

7.  Localization of the gene coding for myosin phosphatase, target subunit 1 (MYPT1) to human chromosome 12q15-q21.

Authors:  N Takahashi; M Ito; J Tanaka; T Nakano; K Kaibuchi; H Odai; K Takemura
Journal:  Genomics       Date:  1997-08-15       Impact factor: 5.736

8.  Spectral density function mapping using 15N relaxation data exclusively.

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9.  High blood pressure arising from a defect in vascular function.

Authors:  Simon K Michael; Howard K Surks; Yuepeng Wang; Yan Zhu; Robert Blanton; Michelle Jamnongjit; Mark Aronovitz; Wendy Baur; Kenichi Ohtani; Michael K Wilkerson; Adrian D Bonev; Mark T Nelson; Richard H Karas; Michael E Mendelsohn
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-30       Impact factor: 11.205

10.  Regulator of G-protein signaling-2 mediates vascular smooth muscle relaxation and blood pressure.

Authors:  K Mary Tang; Guang-rong Wang; Ping Lu; Richard H Karas; Mark Aronovitz; Scott P Heximer; Kevin M Kaltenbronn; Kendall J Blumer; David P Siderovski; Yan Zhu; Michael E Mendelsohn; Mary Tang; Guang Wang
Journal:  Nat Med       Date:  2003-11-09       Impact factor: 53.440

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  1 in total

1.  The Transmembrane Conformation of the Influenza B Virus M2 Protein in Lipid Bilayers.

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  1 in total

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