Literature DB >> 28274744

Performance of the SAMBA I and II HIV-1 Semi-Q Tests for viral load monitoring at the point-of-care.

Neha Goel1, Allyson V Ritchie1, Sekesai Mtapuri-Zinyowera2, Clement Zeh3, Tetiana Stepchenkova4, Jesse Lehga5, Annemiek De Ruiter6, Laura E Farleigh1, Daniel Edemaga5, Rosario So5, Hiroshi Sembongi7, Craig Wisniewski8, Lourdes Nadala5, Marco Schito9, Helen Lee10.   

Abstract

Although access to antiretroviral therapy for HIV infection is increasing in resource-poor countries, viral load testing for monitoring of treatment efficacy remains limited, expensive, and confined to centralized laboratories. The SAMBA HIV-1 Semi-Q Test is a nucleic acid-based amplification assay developed for viral load monitoring performed on either the semi-automated SAMBA I system for laboratory use or the fully automated SAMBA II system for point-of care use. We have assessed the performance characteristics of the SAMBA HIV-1 Semi-Q Test on SAMBA I and SAMBA II systems according to the Common Technical Specifications of the European Community's 98/79 In Vitro Diagnostic Medical Devices Directive. The sensitivity, specificity, reproducibility, and viral subtype coverage of the test were similar on the SAMBA I and SAMBA II platforms. The clinical performance on the SAMBA I system was compared with the Roche CAP/CTM assay and evaluated in-house with 130 patient specimens from London as well as in the field with 390 specimens in Kenya and Zimbabwe. The overall concordance between the SAMBA and CAP/CTM assays was 98.1%. The clinical performance of the test on the SAMBA II platform in comparison with the Abbott HIV-1 RealTime Assay was evaluated in-house with 150 specimens from Ukraine, yielding a concordance of 98.0%. The results thus show that the SAMBA HIV-1 Semi-Q Test performs equivalently on SAMBA I and SAMBA II, and they suggest that the test is suitable for implementation at the point-of-care in resource-poor regions where viral load testing is desperately needed but often unavailable.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Diagnosis; HIV-1; Point-of-care; Therapy monitoring; Viral load

Mesh:

Year:  2017        PMID: 28274744     DOI: 10.1016/j.jviromet.2017.03.001

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  14 in total

1.  Point-of-care HIV viral load testing combined with task shifting to improve treatment outcomes (STREAM): findings from an open-label, non-inferiority, randomised controlled trial.

Authors:  Paul K Drain; Jienchi Dorward; Lauren R Violette; Justice Quame-Amaglo; Katherine K Thomas; Natasha Samsunder; Hope Ngobese; Koleka Mlisana; Pravikrishnen Moodley; Deborah Donnell; Ruanne V Barnabas; Kogieleum Naidoo; Salim S Abdool Karim; Connie Celum; Nigel Garrett
Journal:  Lancet HIV       Date:  2020-02-24       Impact factor: 12.767

Review 2.  Point-of-Care HIV Viral Load Testing: an Essential Tool for a Sustainable Global HIV/AIDS Response.

Authors:  Paul K Drain; Jienchi Dorward; Andrew Bender; Lorraine Lillis; Francesco Marinucci; Jilian Sacks; Anna Bershteyn; David S Boyle; Jonathan D Posner; Nigel Garrett
Journal:  Clin Microbiol Rev       Date:  2019-05-15       Impact factor: 26.132

Review 3.  Point-of-care viral load tests to detect high HIV viral load in people living with HIV/AIDS attending health facilities.

Authors:  Eleanor A Ochodo; Easter Elizabeth Olwanda; Jonathan J Deeks; Sue Mallett
Journal:  Cochrane Database Syst Rev       Date:  2022-03-10

4.  Evaluation of SAMBA II: A Qualitative and Semiquantitative HIV Point-of-Care Nucleic Acid Test.

Authors:  Lauren R Violette; Andy Cornelius-Hudson; Madison Snidarich; Lisa A Niemann; Sonny Michael Assennato; Allyson Ritchie; Neha Goel; Pollyanna R Chavez; Steven F Ethridge; David A Katz; Helen Lee; Kevin P Delaney; Joanne D Stekler
Journal:  J Acquir Immune Defic Syndr       Date:  2022-04-15       Impact factor: 3.771

Review 5.  Diagnosis of Human Immunodeficiency Virus Infection.

Authors:  Bharat S Parekh; Chin-Yih Ou; Peter N Fonjungo; Mireille B Kalou; Erin Rottinghaus; Adrian Puren; Heather Alexander; Mackenzie Hurlston Cox; John N Nkengasong
Journal:  Clin Microbiol Rev       Date:  2018-11-28       Impact factor: 26.132

6.  First field evaluation of the optimized CE marked Abbott protocol for HIV RNA testing on dried blood spot in a routine clinical setting in Vietnam.

Authors:  Fabien Taieb; Tram Tran Hong; Hien Thi Ho; Binh Nguyen Thanh; Tram Pham Phuong; Dung Viet Ta; Nhung Le Thi Hong; Hien Ba Pham; Lan Thi Huong Nguyen; Huong Thi Nguyen; Thu Trang Nguyen; Edouard Tuaillon; Eric Delaporte; Huong Le Thi; Hau Tran Thi Bich; Tuan Anh Nguyen; Yoann Madec
Journal:  PLoS One       Date:  2018-02-09       Impact factor: 3.240

7.  Point-of-care viral load monitoring: outcomes from a decentralized HIV programme in Malawi.

Authors:  Sarala Nicholas; Elisabeth Poulet; Liselotte Wolters; Johanna Wapling; Ankur Rakesh; Isabel Amoros; Elisabeth Szumilin; Monique Gueguen; Birgit Schramm
Journal:  J Int AIDS Soc       Date:  2019-08       Impact factor: 5.396

8.  An updated roadmap for MERS-CoV research and product development: focus on diagnostics.

Authors:  Cassandra Kelly-Cirino; Laura T Mazzola; Arlene Chua; Christopher J Oxenford; Maria D Van Kerkhove
Journal:  BMJ Glob Health       Date:  2019-02-01

9.  Systematic review of the performance and clinical utility of point of care HIV-1 RNA testing for diagnosis and care.

Authors:  Clara A Agutu; Caroline J Ngetsa; Matt A Price; Tobias F Rinke de Wit; Gloria Omosa-Manyonyi; Eduard J Sanders; Susan M Graham
Journal:  PLoS One       Date:  2019-06-27       Impact factor: 3.240

10.  Point of Care Nucleic Acid Testing for SARS-CoV-2 in Hospitalized Patients: A Clinical Validation Trial and Implementation Study.

Authors:  Dami A Collier; Sonny M Assennato; Ben Warne; Nyarie Sithole; Katherine Sharrocks; Allyson Ritchie; Pooja Ravji; Matthew Routledge; Dominic Sparkes; Jordan Skittrall; Anna Smielewska; Isobel Ramsey; Neha Goel; Martin Curran; David Enoch; Rhys Tassell; Michelle Lineham; Devan Vaghela; Clare Leong; Hoi Ping Mok; John Bradley; Kenneth G C Smith; Vivienne Mendoza; Nikos Demiris; Martin Besser; Gordon Dougan; Paul J Lehner; Mark J Siedner; Hongyi Zhang; Claire S Waddington; Helen Lee; Ravindra K Gupta
Journal:  Cell Rep Med       Date:  2020-07-15
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