Literature DB >> 28272984

Exogenous gene integration mediated by genome editing technologies in zebrafish.

Hitoshi Morita1, Kiyohito Taimatsu1, Kanoko Yanagi1, Atsuo Kawahara1.   

Abstract

Genome editing technologies, such as transcription activator-like effector nuclease (TALEN) and the clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein (Cas) systems, can induce DNA double-strand breaks (DSBs) at the targeted genomic locus, leading to frameshift-mediated gene disruption in the process of DSB repair. Recently, the technology-induced DSBs followed by DSB repairs are applied to integrate exogenous genes into the targeted genomic locus in various model organisms. In addition to a conventional knock-in technology mediated by homology-directed repair (HDR), novel knock-in technologies using refined donor vectors have also been developed with the genome editing technologies based on other DSB repair mechanisms, including non-homologous end joining (NHEJ) and microhomology-mediated end joining (MMEJ). Therefore, the improved knock-in technologies would contribute to freely modify the genome of model organisms.

Entities:  

Keywords:  CRISPR/Cas9; MMEJ; NHEJ; TALEN; genome editing; knock-in; zebrafish

Mesh:

Substances:

Year:  2017        PMID: 28272984      PMCID: PMC5470516          DOI: 10.1080/21655979.2017.1300727

Source DB:  PubMed          Journal:  Bioengineered        ISSN: 2165-5979            Impact factor:   3.269


  34 in total

1.  Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells.

Authors:  Z Ivics; P B Hackett; R H Plasterk; Z Izsvák
Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

2.  Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2.

Authors:  I Splawski; J Shen; K W Timothy; M H Lehmann; S Priori; J L Robinson; A J Moss; P J Schwartz; J A Towbin; G M Vincent; M T Keating
Journal:  Circulation       Date:  2000-09-05       Impact factor: 29.690

3.  Efficient gene delivery and gene expression in zebrafish using the Sleeping Beauty transposon.

Authors:  Ann E Davidson; Darius Balciunas; Deanna Mohn; Jennifer Shaffer; Spencer Hermanson; Sridhar Sivasubbu; M Pat Cliff; Perry B Hackett; Stephen C Ekker
Journal:  Dev Biol       Date:  2003-11-15       Impact factor: 3.582

Review 4.  ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering.

Authors:  Thomas Gaj; Charles A Gersbach; Carlos F Barbas
Journal:  Trends Biotechnol       Date:  2013-05-09       Impact factor: 19.536

5.  Precise Editing of the Zebrafish Genome Made Simple and Efficient.

Authors:  Kazuyuki Hoshijima; Michael J Jurynec; David Jonah Grunwald
Journal:  Dev Cell       Date:  2016-03-21       Impact factor: 12.270

6.  Basal keratinocytes contribute to all strata of the adult zebrafish epidermis.

Authors:  Raymond T H Lee; P V Asharani; Thomas J Carney
Journal:  PLoS One       Date:  2014-01-06       Impact factor: 3.240

7.  Efficient generation of knock-in transgenic zebrafish carrying reporter/driver genes by CRISPR/Cas9-mediated genome engineering.

Authors:  Yukiko Kimura; Yu Hisano; Atsuo Kawahara; Shin-ichi Higashijima
Journal:  Sci Rep       Date:  2014-10-08       Impact factor: 4.379

8.  Microhomology-mediated end-joining-dependent integration of donor DNA in cells and animals using TALENs and CRISPR/Cas9.

Authors:  Shota Nakade; Takuya Tsubota; Yuto Sakane; Satoshi Kume; Naoaki Sakamoto; Masanobu Obara; Takaaki Daimon; Hideki Sezutsu; Takashi Yamamoto; Tetsushi Sakuma; Ken-ichi T Suzuki
Journal:  Nat Commun       Date:  2014-11-20       Impact factor: 14.919

9.  A novel positive transcriptional feedback loop in midbrain-hindbrain boundary development is revealed through analysis of the zebrafish pax2.1 promoter in transgenic lines.

Authors:  Alexander Picker; Steffen Scholpp; Heike Böhli; Hiroyuki Takeda; Michael Brand
Journal:  Development       Date:  2002-07       Impact factor: 6.868

10.  Mutations affecting development of the midline and general body shape during zebrafish embryogenesis.

Authors:  M Brand; C P Heisenberg; R M Warga; F Pelegri; R O Karlstrom; D Beuchle; A Picker; Y J Jiang; M Furutani-Seiki; F J van Eeden; M Granato; P Haffter; M Hammerschmidt; D A Kane; R N Kelsh; M C Mullins; J Odenthal; C Nüsslein-Volhard
Journal:  Development       Date:  1996-12       Impact factor: 6.868

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  1 in total

1.  Cloning, characterization, and transcriptional activity of β-actin promoter of African catfish (Clarias gariepinus).

Authors:  Maocang Yan; Guangxu Liu; Sanghyok Ri; Wenho Hwang; Sangryong Ri; Wei Shi; Yu Han; Yu Tang; Lining Zhang
Journal:  Mol Biol Rep       Date:  2021-04-07       Impact factor: 2.316

  1 in total

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