Literature DB >> 28265096

G-quadruplex-forming promoter sequences enable transcriptional activation in response to oxidative stress.

Bogdan I Fedeles1,2.   

Abstract

Mesh：

Year:  2017        PMID： 28265096      PMCID： PMC5358374          DOI： 10.1073/pnas.1701244114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  22 in total

1.  KDM1A triggers androgen-induced miRNA transcription via H3K4me2 demethylation and DNA oxidation.

Authors:  Shu Yang; Jiyuan Zhang; Yalong Zhang; Xuechao Wan; Congzhe Zhang; Xiaohui Huang; Wenhua Huang; Honglei Pu; Chaohan Pei; Hai Wu; Yan Huang; Shengdong Huang; Yao Li
Journal:  Prostate       Date:  2015-03-01       Impact factor: 4.104

Review 2.  Removal of oxidatively generated DNA damage by overlapping repair pathways.

Authors:  Vladimir Shafirovich; Nicholas E Geacintov
Journal:  Free Radic Biol Med       Date:  2016-11-04       Impact factor: 7.376

Review 3.  Occurrence, Biological Consequences, and Human Health Relevance of Oxidative Stress-Induced DNA Damage.

Authors:  Yang Yu; Yuxiang Cui; Laura J Niedernhofer; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2016-11-07       Impact factor: 3.739

4.  An oxidative DNA "damage" and repair mechanism localized in the VEGF promoter is important for hypoxia-induced VEGF mRNA expression.

Authors:  Viktor Pastukh; Justin T Roberts; David W Clark; Gina C Bardwell; Mita Patel; Abu-Bakr Al-Mehdi; Glen M Borchert; Mark N Gillespie
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2015-10-02       Impact factor: 5.464

Review 5.  Controlled DNA "damage" and repair in hypoxic signaling.

Authors:  Mark N Gillespie; Viktor M Pastukh; Mykhaylo V Ruchko
Journal:  Respir Physiol Neurobiol       Date:  2010-09-08       Impact factor: 1.931

6.  Oxidized Guanine Base Lesions Function in 8-Oxoguanine DNA Glycosylase-1-mediated Epigenetic Regulation of Nuclear Factor κB-driven Gene Expression.

Authors:  Lang Pan; Bing Zhu; Wenjing Hao; Xianlu Zeng; Spiros A Vlahopoulos; Tapas K Hazra; Muralidhar L Hegde; Zsolt Radak; Attila Bacsi; Allan R Brasier; Xueqing Ba; Istvan Boldogh
Journal:  J Biol Chem       Date:  2016-10-18       Impact factor: 5.157

7.  Initiation of base excision repair of oxidative lesions in nucleosomes by the human, bifunctional DNA glycosylase NTH1.

Authors:  Amalthiya Prasad; Susan S Wallace; David S Pederson
Journal:  Mol Cell Biol       Date:  2007-10-08       Impact factor: 4.272

Review 8.  Transcriptional regulatory functions of mammalian AP-endonuclease (APE1/Ref-1), an essential multifunctional protein.

Authors:  Kishor K Bhakat; Anil K Mantha; Sankar Mitra
Journal:  Antioxid Redox Signal       Date:  2009-03       Impact factor: 8.401

9.  G quadruplexes are genomewide targets of transcriptional helicases XPB and XPD.

Authors:  Lucas T Gray; Aarthy C Vallur; Johanna Eddy; Nancy Maizels
Journal:  Nat Chem Biol       Date:  2014-03-09       Impact factor: 15.040

10.  G4IPDB: A database for G-quadruplex structure forming nucleic acid interacting proteins.

Authors:  Subodh Kumar Mishra; Arpita Tawani; Amit Mishra; Amit Kumar
Journal:  Sci Rep       Date:  2016-12-01       Impact factor: 4.379
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  11 in total

1.  Conserved G-Quadruplex Motifs in Gene Promoter Region Reveals a Novel Therapeutic Approach to Target Multi-Drug Resistance Klebsiella pneumoniae.

Authors:  Uma Shankar; Neha Jain; Subodh Kumar Mishra; Tarun Kumar Sharma; Amit Kumar
Journal:  Front Microbiol       Date:  2020-06-26       Impact factor: 5.640

Review 2.  Stress Marks on the Genome: Use or Lose?

Authors:  Bayan Bokhari; Sudha Sharma
Journal:  Int J Mol Sci       Date:  2019-01-16       Impact factor: 5.923

Review 3.  Oxidative Stress: Role and Response of Short Guanine Tracts at Genomic Locations.

Authors:  Anju Singh; Ritushree Kukreti; Luciano Saso; Shrikant Kukreti
Journal:  Int J Mol Sci       Date:  2019-08-30       Impact factor: 5.923

4.  Endogenous oxidized DNA bases and APE1 regulate the formation of G-quadruplex structures in the genome.

Authors:  Shrabasti Roychoudhury; Suravi Pramanik; Hannah L Harris; Mason Tarpley; Aniruddha Sarkar; Gaelle Spagnol; Paul L Sorgen; Dipanjan Chowdhury; Vimla Band; David Klinkebiel; Kishor K Bhakat
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-13       Impact factor: 11.205

Review 5.  On the epigenetic role of guanosine oxidation.

Authors:  Marco Giorgio; Gaetano Ivan Dellino; Valentina Gambino; Niccolo' Roda; Pier Giuseppe Pelicci
Journal:  Redox Biol       Date:  2019-12-06       Impact factor: 11.799

Review 6.  The Relevance of G-Quadruplexes for DNA Repair.

Authors:  Rebecca Linke; Michaela Limmer; Stefan A Juranek; Annkristin Heine; Katrin Paeschke
Journal:  Int J Mol Sci       Date:  2021-11-22       Impact factor: 5.923

7.  Averting a sweet demise: sugars change the transcriptional hypoxia response in maize roots.

Authors:  Sjon Hartman
Journal:  Plant Physiol       Date:  2021-03-15       Impact factor: 8.340

8.  Sugar modulation of anaerobic-response networks in maize root tips.

Authors:  Maria-Angelica Sanclemente; Fangfang Ma; Peng Liu; Adriana Della Porta; Jugpreet Singh; Shan Wu; Thomas Colquhoun; Timothy Johnson; Jiahn-Chou Guan; Karen E Koch
Journal:  Plant Physiol       Date:  2021-03-15       Impact factor: 8.340

9.  Temperature and pressure limits of guanosine monophosphate self-assemblies.

Authors:  Mimi Gao; Balasubramanian Harish; Melanie Berghaus; Rana Seymen; Loana Arns; Scott A McCallum; Catherine A Royer; Roland Winter
Journal:  Sci Rep       Date:  2017-08-29       Impact factor: 4.379

Review 10.  Natural Alkaloids and Heterocycles as G-Quadruplex Ligands and Potential Anticancer Agents.

Authors:  Tong Che; Yu-Qing Wang; Zhou-Li Huang; Jia-Heng Tan; Zhi-Shu Huang; Shuo-Bin Chen
Journal:  Molecules       Date:  2018-02-23       Impact factor: 4.411
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