| Literature DB >> 28261684 |
Ali Mahdavinezhad1, Reza Yadegarazari2, Seyed Habibollah Mousavi-Bahar3, Jalal Poorolajal4, Mohammad Jafari5, Mohammad Ali Amirzargar3, Hosein Effatpanah6, Massoud Saidijam1.
Abstract
PURPOSE: The fifth most common cancer is allocated to bladder cancer (BC) worldwide. Understanding the molecular mechanisms of BC invasion and metastasis to identify target therapeutic strategies will improve disease survival. So the aim of this study was to measure expression rate of zinc finger E-box binding homeobox 1 (ZEB1) and transforming growth factor-beta2 (TGF-β2) mRNA in tissue samples of patients with BC and its healthy adjacent tissue samples and their association with muscle invasion, size and grade of the tumor.Entities:
Keywords: Neoplasm grading; Transforming growth factor beta2; Urinary bladder neoplasms; ZEB1 protein
Mesh:
Substances:
Year: 2017 PMID: 28261684 PMCID: PMC5330373 DOI: 10.4111/icu.2017.58.2.140
Source DB: PubMed Journal: Investig Clin Urol ISSN: 2466-0493
Characteristics of TGF-β2 and ZEB1 mRNA primers designed with allele ID6 software
| Property | All variants in NCBI database | 18s rRNA [ | |
|---|---|---|---|
| TGF-β2 | ZEB1 | ||
| NCBI accession number | NM_001135599.2 | NM_001174096.1 | X03205 |
| Forward primer | gagtgcctgaacaacggatt | tgaatcatcgctactcctactct | gtaacccgttgaaccccatt |
| Primer length | 20 | 23 | 20 |
| Amount of use | 10 pmol | 10 pmol | 10 pmol |
| Reverse primer | ttcacaactttgctgtcgatg | tttcactgtcttcatcctcttccc | ccatccaatcggtagtagcg |
| Primer length | 21 | 24 | 20 |
| Amplicon length | 94 | 177 | 151 |
TGF-β2, transforming growth factor-beta2; ZEB1, zinc finger E-box binding homeobox 1; NCBI, National Center for Biotechnology Information.
ΔCT values of ZEB1 and TGF-β2 between case and control groups
| Variable | Case | Control | Difference | p-valuea | ||
|---|---|---|---|---|---|---|
| No. | Mean±SD | No. | Mean±SD | Mean±SD | ||
| ZEB1 | 35 | 9.36±2.49 | 35 | 10.49±2.39 | 1.13±3.16 | 0.042 |
| TGF-β2 | 35 | 10.17±2.54 | 35 | 9.80±1.67 | 0.37±3.10 | 0.499 |
ΔCT=(CT of the mRNA target–CT of the reference gene).
CT, cycle threshold; ZEB1, zinc finger E-box binding homeobox 1; TGF-β2, transforming growth factor-beta2; SD, standard deviaiton.
a:Paried t-test.
Expression state of ZEB1 and TGF-β2 in according to smoking
| Variable | Nonsmoker | Smoker | Difference | p-valuea | ||
|---|---|---|---|---|---|---|
| Number | Mean±SD | Nmber | Mean±SD | Mean±SE | ||
| ZEB1 | 12 | 9.17±2.83 | 23 | 9.46±2.35 | 0.29±0.90 | 0.749 |
| TGF-β2 | 12 | 9.85±2.85 | 23 | 10.33±2.41 | 0.48±0.91 | 0.599 |
ZEB1, zinc finger E-box binding homeobox 1; TGF-β2, transforming growth factor-beta2; SD, standard deviation; SE, standard error.
a:t-test.
ΔCT values and relative quantification between nonmuscle invasive bladder cancer and muscle invasive bladder cancer
| Variable | NMIBC | MIBC | Difference | p-value | Fold change in MIBC vs. NMIBC | ||
|---|---|---|---|---|---|---|---|
| Number | Mean±SD | Number | Mean±SD | Mean±SE | |||
| ZEB1 | 22 | 9.93±2.45 | 13 | 8.38±2.32 | 1.55±0.84 | 0.073 | 2.73 |
| TGF-β2 | 22 | 11.14±1.65 | 13 | 8.51±2.97 | 2.63±0.78 | 0.001 | 6.19 |
ΔCT=(CT of the mRNA target–CT of the reference gene).
CT, cycle threshold; MIBC, muscle invasive bladder cancer; NMIBC, nonmuscle invasive bladder cancer; ZEB1, zinc finger E-box binding homeobox 1; TGF-β2, transforming growth factor-beta2; SD, standard deviation; SE, standard error.
Association between grading and ZEB1 and TGF-β2 expression
| Variable | PUNLMP | LG | HG | p-valuea | |||
|---|---|---|---|---|---|---|---|
| Number | Mean±SD | Number | Mean±SD | Number | Mean±SD | ||
| ZEB1 | 2 | 11.72±1.73 | 16 | 9.39±2.59 | 17 | 9.04±2.41 | 0.363 |
| TGF-β2 | 2 | 12.75±0.56 | 16 | 10.64±1.62 | 17 | 9.41±3.09 | 0.127 |
ZEB1, zinc finger E-box binding homeobox 1; TGF-β2, transforming growth factor-beta2; SD, standard deviation; PUNLMP, papillary urothelial neoplasm of low malignant potential; LG, low grade carcinoma; HG, high grade carcinoma.
a:Analysis of variance.
ZEB1 and TGF-β2 mRNA expression and relative quantification between tumors with size<10 cm2 and size≥10 cm2
| Variable | Size<10 cm2 | Size≥10 cm2 | Difference | p-valuea | Fold change size≥10 cm2 vs. size<10 cm2 | ||
|---|---|---|---|---|---|---|---|
| Number | Mean±SD | Number | Mean±SD | Mean±SD | |||
| ZEB1 | 23 | 9.98±2.62 | 12 | 8.17±1.73 | 1.81±0.84 | 0.039 | 3.50 |
| TGF-β2 | 23 | 10.41±2.52 | 12 | 9.69±2.61 | 0.72±0.91 | 0.431 | 1.65 |
ZEB1, zinc finger E-box binding homeobox 1; TGF-β2, transforming growth factor-beta2; SD, standard deviation; SE, standard error.
a:t-test.