Literature DB >> 28260819

Synthesis of Site-Specifically 13C Labeled Linoleic Acids.

Adam R Offenbacher1, Hui Zhu1, Judith P Klinman2.   

Abstract

Soybean lipoxygenase-1 (SLO-1) catalyzes the C-H abstraction from the reactive carbon (C-11) in linoleic acid as the first and rate-determining step in the formation of alkylhydroperoxides. While previous labeling strategies have focused on deuterium labeling to ascertain the primary and secondary kinetic isotope effects for this reaction, there is an emerging interest and need for selectively enriched 13C isotopologues. In this report, we present synthetic strategies for site-specific 13C labeled linoleic acid substrates. We take advantage of a Corey-Fuchs formyl to terminal 13C-labeled alkyne conversion, using 13CBr4 as the labeling source, to reduce the number of steps from a previous fatty acid 13C synthetic labeling approach. The labeled linoleic acid substrates are useful as nuclear tunneling markers and for extracting active site geometries of the enzyme-substrate complex in lipoxygenase.

Entities:  

Keywords:  Secondary isotope effects; hydrogen tunneling; linoleic acid; lipoxygenase

Year:  2016        PMID: 28260819      PMCID: PMC5333924          DOI: 10.1016/j.tetlet.2016.08.071

Source DB:  PubMed          Journal:  Tetrahedron Lett        ISSN: 0040-4039            Impact factor:   2.415


  26 in total

1.  Temperature-dependent isotope effects in soybean lipoxygenase-1: correlating hydrogen tunneling with protein dynamics.

Authors:  Michael J Knapp; Keith Rickert; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2002-04-17       Impact factor: 15.419

Review 2.  Lipoxygenase and leukotriene pathways: biochemistry, biology, and roles in disease.

Authors:  Jesper Z Haeggström; Colin D Funk
Journal:  Chem Rev       Date:  2011-09-22       Impact factor: 60.622

Review 3.  A comprehensive model of positional and stereo control in lipoxygenases.

Authors:  Gianguido Coffa; Claus Schneider; Alan R Brash
Journal:  Biochem Biophys Res Commun       Date:  2005-08-10       Impact factor: 3.575

4.  Linking protein structure and dynamics to catalysis: the role of hydrogen tunnelling.

Authors:  Judith P Klinman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-08-29       Impact factor: 6.237

Review 5.  Are alkyne reductions chemo-, regio-, and stereoselective enough to provide pure (Z)-olefins in polyfunctionalized bioactive molecules?

Authors:  Camille Oger; Laurence Balas; Thierry Durand; Jean-Marie Galano
Journal:  Chem Rev       Date:  2012-11-29       Impact factor: 60.622

6.  Nature of hydrogen transfer in soybean lipoxygenase 1: separation of primary and secondary isotope effects.

Authors:  K W Rickert; J P Klinman
Journal:  Biochemistry       Date:  1999-09-21       Impact factor: 3.162

7.  Investigating inner-sphere reorganization via secondary kinetic isotope effects in the C-H cleavage reaction catalyzed by soybean lipoxygenase: tunneling in the substrate backbone as well as the transferred hydrogen.

Authors:  Matthew P Meyer; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2010-12-30       Impact factor: 15.419

8.  Control of the Position of Oxygen Delivery in Soybean Lipoxygenase-1 by Amino Acid Side Chains within a Gas Migration Channel.

Authors:  Lara Collazo; Judith P Klinman
Journal:  J Biol Chem       Date:  2016-02-10       Impact factor: 5.157

9.  Synthesis of isotopically labeled arachidonic acids to probe the reaction mechanism of prostaglandin H synthase.

Authors:  Sheng Peng; Nicole M Okeley; Ah-Lim Tsai; Gang Wu; Richard J Kulmacz; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2002-09-11       Impact factor: 15.419

10.  Kinetic isotope effects in the oxidation of arachidonic acid by soybean lipoxygenase-1.

Authors:  Cyril Jacquot; Sheng Peng; Wilfred A van der Donk
Journal:  Bioorg Med Chem Lett       Date:  2008-08-31       Impact factor: 2.823

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  2 in total

1.  Hydrogen-deuterium exchange reveals long-range dynamical allostery in soybean lipoxygenase.

Authors:  Adam R Offenbacher; Anthony T Iavarone; Judith P Klinman
Journal:  J Biol Chem       Date:  2017-11-30       Impact factor: 5.157

2.  13C ENDOR Spectroscopy of Lipoxygenase-Substrate Complexes Reveals the Structural Basis for C-H Activation by Tunneling.

Authors:  Masaki Horitani; Adam R Offenbacher; Cody A Marcus Carr; Tao Yu; Veronika Hoeke; George E Cutsail; Sharon Hammes-Schiffer; Judith P Klinman; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2017-01-25       Impact factor: 15.419

  2 in total

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