Literature DB >> 28239779

Variation in barley (1 → 3, 1 → 4)-β-glucan endohydrolases reveals novel allozymes with increased thermostability.

Juanita C Lauer1, Suong Cu2, Rachel A Burton2, Jason K Eglinton3.   

Abstract

KEY MESSAGE: Novel barley (1 → 3, 1 → 4)-β-glucan endohydrolases with increased thermostability. Rapid and reliable degradation of (1 → 3, 1 → 4)-β-glucan to produce low viscosity wort is an essential requirement for malting barley. The (1 → 3, 1 → 4)-β-glucan endohyrolases are responsible for the primary hydrolysis of cell wall β-glucan. The variation in β-glucanase genes HvGlb1 and HvGlb2 that encode EI and EII, respectively, were examined in elite and exotic germplasm. Six EI and 14 EII allozymes were identified, and significant variation was found in β-glucanase from Hordeum vulgare ssp. spontaneum (wild barley), the progenitor of modern cultivated barley. Allozymes were examined using prediction methods; the change in Gibbs free energy of the identified amino acid substitutions to predict changes in enzyme stability and homology modelling to examine the structure of the novel allozymes using the existing solved EII structure. Two EI and four EII allozymes in wild barley accessions were predicted to have improved barley β-glucanase thermostability. One novel EII candidate was identified in existing backcross lines with contrasting HvGlb2 alleles from wild barley and cv Flagship. The contrasting alleles in selected near isogenic lines were examined in β-glucanase thermostability analyses. The EII from wild barley exhibited a significant increase in β-glucanase thermostability conferred by the novel HvGlb2 allele. Increased β-glucanase thermostability is heritable and candidates identified in wild barley could improve malting and brewing quality in new varieties.

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Year:  2017        PMID: 28239779     DOI: 10.1007/s00122-017-2870-z

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  19 in total

1.  Structure and tissue-specific regulation of genes encoding barley (1----3, 1----4)-beta-glucan endohydrolases.

Authors:  N Slakeski; D C Baulcombe; K M Devos; B Ahluwalia; D N Doan; G B Fincher
Journal:  Mol Gen Genet       Date:  1990-12

2.  Complete Nucleotide Sequence of a Hordeum vulgare Gene Encoding (1-->3, 1-->4)-beta-Glucanase Isoenzyme II.

Authors:  N Wolf
Journal:  Plant Physiol       Date:  1991-08       Impact factor: 8.340

3.  Structural modeling of glucanase-substrate complexes suggests a conserved tyrosine is involved in carbohydrate recognition in plant 1,3-1,4-beta-D-glucanases.

Authors:  Li-Chu Tsai; Yi-Ning Chen; Lie-Fen Shyur
Journal:  J Comput Aided Mol Des       Date:  2008-07-29       Impact factor: 3.686

4.  Transgenic barley expressing a protein-engineered, thermostable (1,3-1,4)-beta-glucanase during germination.

Authors:  L G Jensen; O Olsen; O Kops; N Wolf; K K Thomsen; D von Wettstein
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-16       Impact factor: 11.205

5.  Developmental Regulation of (1-->3, 1-->4)-beta-Glucanase Gene Expression in Barley : Tissue-Specific Expression of Individual Isoenzymes.

Authors:  N Slakeski; G B Fincher
Journal:  Plant Physiol       Date:  1992-07       Impact factor: 8.340

6.  Crystal structure of barley 1,3-1,4-beta-glucanase at 2.0-A resolution and comparison with Bacillus 1,3-1,4-beta-glucanase.

Authors:  J J Müller; K K Thomsen; U Heinemann
Journal:  J Biol Chem       Date:  1998-02-06       Impact factor: 5.157

7.  Structure of the genes encoding Hordeum vulgare (1----3,1----4)-beta-glucanase isoenzymes I and II and functional analysis of their promoters in barley aleurone protoplasts.

Authors:  N Wolf
Journal:  Mol Gen Genet       Date:  1992-07

8.  Cloning of beta-1,3-1,4-glucanase gene from Bacillus licheniformis EGW039 (CGMCC 0635) and its expression in Escherichia coli BL21 (DE3).

Authors:  Da Teng; Jian-hua Wang; Ying Fan; Ya-lin Yang; Zi-gang Tian; Jin Luo; Guan-pin Yang; Fan Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2006-02-10       Impact factor: 4.813

9.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

10.  Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol.

Authors:  Fei Lu; Alexander E Lipka; Jeff Glaubitz; Rob Elshire; Jerome H Cherney; Michael D Casler; Edward S Buckler; Denise E Costich
Journal:  PLoS Genet       Date:  2013-01-17       Impact factor: 5.917

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