| Literature DB >> 28235749 |
Shinichi Matsuda1, Kotonari Aoki1, Shiho Tomizawa1, Masayoshi Sone2, Riwa Tanaka3, Hiroshi Kuriki4, Yoichiro Takahashi1.
Abstract
BACKGROUND: Although several reports have suggested that patient-generated data from Internet sources could be used to improve drug safety and pharmacovigilance, few studies have identified such data sources in Japan. We introduce a unique Japanese data source: tōbyōki, which translates literally as "an account of a struggle with disease."Entities:
Keywords: Internet; adverse drug reaction; pharmacovigilance; social media; text mining
Year: 2017 PMID: 28235749 PMCID: PMC5346166 DOI: 10.2196/publichealth.6872
Source DB: PubMed Journal: JMIR Public Health Surveill ISSN: 2369-2960
Example of excerpts from tōbyōki blog.
| Name of disorder | Excerpt from each | |
| Breast cancer | I showed my leg with a ruptured blister to my doctor. He said it is a side effect of docetaxel and it needs a long time to be cured. Also, I was advised to avoid secondary infection from this site. | |
| Depression | After changing clinics, I reduced the number of drugs I’m taking. At first I couldn’t help being nervous, but I’m feeling well now; morning milnacipran 15 mg, alprazolam 0.4 mg, mid-afternoon alprazolam 0.4 mg (as needed), evening milnacipran 15 mg, alprazolam 0.4 mg. That’s all. | |
| Rheumatoid arthritis | Thanks to my second dose of etanercept, the pain in my joints is completely gone! Because of this dramatic improvement, my doctor reduced my prescription of methotrexate to 2 mg/day, and also promised to reduce my steroids, too. I am really happy because I can escape from the side effects of steroids, which are the hardest thing for me... |
aAll entries are translated from Japanese. To protect patient privacy, minor changes were made to texts while maintaining the meaning of original contexts.
Figure 1Overall flow of data in the TOBYO database.(1) This study focuses on tōbyōki blogs that are publicly available on the Internet. Generally, there is a substantial volume of noise (white) unrelated to tōbyōki blogs (shaded). (2) Based on selection criteria described in Methods, filtering of tōbyōki blogs is performed manually, (3) and noise such as blogs written by companies is excluded. (4) Appropriate tōbyōki blogs are registered in the TOBYO database and stored for additional analysis.
Figure 2Work flow for morphological analysis and preparation of datasets.
Figure 3Calculation of the Jaccard coefficient.
Distribution of gender and age at onset in TOBYO database.
| Variable | Category | All, n (%)a | Male, n (%)a | Female, n (%)a | Unknown, n (%)a |
| 54,010 (100) | 16,633 (31) | 37,161 (69) | 216 (0) | ||
| ≤19 years old | 8730 (16) | 4045 (24) | 4654 (13) | 31 (14) | |
| 20-34 years old | 13,201 (24) | 2726 (16) | 10,460 (28) | 15 (7) | |
| 35-49 years old | 8830 (16) | 2450 (15) | 6371 (17) | 9 (4) | |
| 50-64 years old | 2048 (4) | 1083 (7) | 961 (3) | 4 (2) | |
| ≥65 years old | 808 (2) | 381 (2) | 1 (1) | ||
| Unknown | 20,393 (38) | 5948 (36) | 14,289 (39) | 156 (72) |
aNumber of blogs equals number of patients. Because of rounding, total values for proportion are not always 100%.
bAge at onset of primary disorder was obtained by checking profile or introductory page of each blog.
Figure 4Comparison of population distribution between the TOBYO database and external databases.
Primary disorders frequently described in the TOBYO database.
| Name of disorders | Corresponding preferred term of MedDRA (version 19.1) | Gender: all, number of blogs and proportion among all disorders, n (%)a | Gender: male, number of blogs and proportion among each disorder, n (%)a | Gender: female, number of blogs and proportion among each disorder, n (%)a | Gender: unknown, number of blogs and proportion among each disorder, n (%)a |
| Breast cancer | Breast cancer | 4983 (9) | 6 (0) | 4974 (100) | 3 (0) |
| Depression | Depression | 3556 (7) | 1467 (41) | 2077 (58) | 12 (0) |
| Infertility | Infertility | 2430 (5) | 16 (1) | 2411 (99) | 3 (0) |
| Rheumatoid arthritis | Rheumatoid arthritis | 1118 (2) | 71 (6) | 1045 (94) | 2 (0) |
| Panic disorder | Panic disorder | 1090 (2) | 202 (19) | 881 (81) | 7 (1) |
| Schizophrenia | Schizophrenia | 1024 (2) | 336 (33) | 683 (67) | 5 (1) |
| Cervical cancer | Cervix carcinoma | 934 (2) | 0 (0) | 933 (100) | 1 (0) |
| Hysteromyoma | Uterine leiomyoma | 802 (2) | 0 (0) | 802 (100) | 0 (0) |
| Type 1 diabetes mellitus | Type 1 diabetes mellitus | 792 (2) | 188 (24) | 602 (76) | 2 (0) |
| Ulcerative colitis | Colitis ulcerative | 683 (1) | 253 (37) | 428 (63) | 2 (0) |
| Systemic lupus erythematosus | Systemic lupus erythematosus | 665 (1) | 33 (5) | 631 (95) | 1 (0) |
| Eating disorder | Eating disorder | 664 (1) | 11 (2) | 651 (98) | 2 (0) |
| Others | 35,269 (65) |
aNumber of blogs equals number of patients. Because of rounding, total values for proportion are not always 100%.
Category for primary disorders frequently described in the TOBYO database.
| Name of grouped category of disorders | Corresponding System Organ Class of MedDRA (version 19.1) | Gender: all, number of blogs and proportion among all disorders, n (%)a | Gender: male, number of blogs and proportion among each disorder, n (%)a | Gender: female, number of blogs and proportion among each disorder, n (%)a | Gender: unknown, number of blogs and proportion among each disorder, n (%)a | |
| Neoplasms benign, malignant, and unspecified | Neoplasms benign, malignant, and unspecified (including cysts and polyps) | 16,851 (31) | 4196 (25) | 12,621 (75) | 34 (0) | |
| Psychiatric and behavior disorders | Psychiatric disorders | 12,334 (23) | 4281 (35) | 7998 (65) | 55 (0) | |
| Kidney, urological, or genital disorders | Renal and urinary disorders | 4507 (8) | 774 (17) | 3710 (82) | 23 (1) | |
| Muscular, bone, or articular disorders | Musculoskeletal and connective tissue disorders | 4471 (8) | 648 (15) | 3813 (85) | 10 (0) | |
| Congenital disorders or abnormal chromosome | Congenital, familial, and genetic disorders | 2972 (6) | 1455 (49) | 1496 (50) | 21 (1) | |
| Neurological disorders | Nervous system disorders | 2877 (5) | 1171 (41) | 1691 (59) | 15 (1) | |
| Endocrine, nutritional, or metabolic disorders | Metabolism and nutrition disordersb | 2269 (4) | 636 (28) | 1626 (72) | 7 (0) | |
| Digestive system disorders | Gastrointestinal disorders | 1876 (4) | 773 (41) | 1093 (58) | 10 (1) | |
| Circulatory conditions | Cardiac disorders | 1523 (3) | 933 (61) | 580 (38) | 10 (1) | |
| Infections and infestations | Infections and infestations | 849 (2) | 480 (57) | 357 (42) | 12 (1) | |
| Blood, hematopoietic, or immunological disorders | Blood and lymphatic system disorders | 777 (1) | 314 (40) | 458 (59) | 5 (1) | |
| Skin disorders | Skin and subcutaneous tissue disorders | 755 (1) | 230 (31) | 521 (69) | 4 (1) | |
| Others | 1949 (4) |
aNumber of blogs equals number of patients. Because of rounding, total values for proportion are not always 100%.
bThere was an another possible MedDRA coding: endocrine disorders.
Figure 5Additional characteristics of the TOBYO database.
Comparison of events in patients with depression in the TOBYO database and JADER database.
| Medical terms observed in the TOBYO database | Medical terms observed in the JADER database | ||||||
| Rank | Event description in the TOBYO database | MedDRA Preferred Terms in the TOBYO database | Number of events | Rank | Number of events | ||
| 1 | Adverse reactionc | Adverse reaction | 9977 | 1 | Inappropriate antidiuretic hormone secretion | 247 | |
| 2 | Depression | Depression | 6218 | 2 | Serotonin syndrome | 226 | |
| 3a | Anxiety | Anxiety | 5695 | 3 | Suicide attempt | 213 | |
| 4 | Headache | Headache | 2977 | 4 | Seizure | 153 | |
| 5 | Pain | Pain | 2016 | 5 | Completed suicide | 152 | |
| 6 | Withdrawal symptom | Withdrawal syndrome | 1848 | 6 | Hyponatraemia | 143 | |
| 7 | Stress | Stress | 1194 | 7a | Mania | 121 | |
| 8 | Malaise | Malaise | 1162 | 8 | Neuroleptic malignant syndrome | 108 | |
| 9a | Feeling queasy | Nausea | 1140 | 9a | Dizziness | 103 | |
| 10 | Constipation | Constipation | 897 | 10a | Nausea | 101 | |
| 11 | Psychosisc | Mental disorder | 777 | 11 | Aggression | 100 | |
| 12a | Dizzy | Dizziness | 762 | 12 | Suicidal ideation | 96 | |
| 13 | Paroxysmal attackc | Seizure-like phenomena | 691 | 13 | Hepatic function abnormal | 93 | |
| 14 | Emotional instabilityc | Affect lability | 685 | 14a | Tremor | 92 | |
| 15 | Abnormality | NAb | 641 | 15 | Altered state of consciousness | 90 | |
| 16 | Sufferingc | Sense of oppression | 637 | 16 | Activation syndromed | 86 | |
| 17 | Feeling downc | Depressed mood | 619 | 17 | Irritability | 85 | |
| 18 | Sleep disorder | Sleep disorder | 601 | 18 | Loss of consciousness | 78 | |
| 19 | Schizophrenia | Schizophrenia | 479 | 19a | Anxiety | 75 | |
| 20 | Allergy | Hypersensitivity | 474 | 20 | Hallucination | 74 | |
| 21a | Mania | Mania | 472 | 21 | Somnolence | 69 | |
| 22 | Migraine | Migraine | 445 | 22 | Delirium | 68 | |
| 23 | Pollinosis | Seasonal allergy | 427 | 23 | Liver disorder | 61 | |
| 24 | Hypersomnia | Hypersomnia | 418 | 24 | Urinary retention | 60 | |
| 25 | Bipolar disorder | Bipolar disorder | 376 | 25 | Overdose | 58 | |
| 26 | Diarrhea | Diarrhea | 368 | 26a | Intentional self-injury | 57 | |
| 27a | Trembling | Tremor | 326 | 27 | Electrocardiogram QT prolonged | 56 | |
| 28 | Panic disorder | Panic disorder | 314 | 28 | Drug withdrawal syndrome neonatal | 53 | |
| 29 | Asthma | Asthma | 294 | 29 | Insomnia | 50 | |
| 30 | Weight increased | Weight increased | 284 | Intentional overdose | 50 | ||
| 31 | Diabetes mellitus | Diabetes mellitus | 281 | ||||
| 32 | Ache stomach | Abdominal pain upper | 277 | ||||
| 33 | Psychiatric disorderc | Mental disorder | 266 | ||||
| 34 | Vomiting | Vomiting | 240 | ||||
| 35 | Abdominal pain | Abdominal pain | 237 | ||||
| 36 | Slight fever | Pyrexia | 231 | ||||
| 37 | Influenza | Influenza | 228 | ||||
| 38 | Physical deconditioning | Asthenia | 226 | ||||
| 39 | Myalgia | Myalgia | 225 | ||||
| 40 | Dependence | Dependence | 210 | ||||
| 41 | Inflammation | Inflammation | 206 | ||||
| 42 | Panic attack | Panic attack | 197 | ||||
| 43a | Self-injury | Intentional self-injury | 194 | ||||
| 44 | Hypertension | Hypertension | 179 | ||||
| 45 | Severe pain | Pain | 152 | ||||
aEvents appearing in both databases (the TOBYO database and JADER database).
bNA (not applicable) in columns for MedDRA PTs (preferred terms) means there was no corresponding term in MedDRA.
cCoding discrepancies occurred between the 2 reviewers (the different suggestions from the reviewers are shown in parentheses): Adverse reaction (adverse reaction or adverse drug reaction), Psychosis (mental disorder or psychotic disorder), Paroxysmal attack (seizure-like phenomena or seizure), Emotional instability (affect lability or feeling abnormal), Suffering (sense of oppression or emotional distress), Feeling down (depressed mood or emotional distress), and Psychiatric disorder (mental disorder or psychotic disorder).
dActivation syndrome is a generic term used for central nervous system stimulation symptoms that are potential adverse effects caused by selective serotonin reuptake inhibitors.
Comparison of events in patients with rheumatoid arthritis in the TOBYO database and JADER database.
| Medical terms observed in the TOBYO database | Medical terms observed in the JADER database | ||||||
| # | Event description in the TOBYO database | MedDRA PTs in the TOBYO database | Number of events | # | MedDRA PTs in the JADER database | Number of events | |
| 1 | Rheumatoid arthritis | Rheumatoid arthritis | 9193 | 1a | Pneumonia | 1109 | |
| 2 | Pain | Pain | 6471 | 2a | Interstitial lung disease | 835 | |
| 3 | Adverse reactionc | Adverse reaction | 4378 | 3 | 575 | ||
| 4 | Inflammation | Inflammation | 1044 | 4 | Cellulitis | 330 | |
| 5 | Swelling | Swelling | 761 | 5 | Sepsis | 292 | |
| 6 | Feeling queasy | Nausea | 661 | 6 | Herpes zoster | 255 | |
| 7 | Abnormality | NAb | 440 | 7 | Pyrexia | 252 | |
| 8 | Headache | Headache | 419 | 8 | Pneumonia bacterial | 216 | |
| 9 | Allergy | Hypersensitivity | 385 | 9 | Infusion-related reaction | 215 | |
| 10 | Stress | Stress | 380 | 10 | Pulmonary tuberculosis | 189 | |
| 11 | Collagen disorder | Collagen disorder | 373 | 11 | White blood cell count decreased | 159 | |
| 12 | Diarrhoea | Diarrhoea | 370 | 12 | Arthritis bacterial | 149 | |
| 13 | Unwell | Malaise | 357 | 13 | Lymphoma | 147 | |
| 14 | Pollinosis | Seasonal allergy | 340 | 14 | Atypical mycobacterial infection | 130 | |
| 15 | Severe pain | Pain | 306 | 15a | Hepatic function abnormal | 121 | |
| 16 | Osteoporosis | Osteoporosis | 276 | 16 | Pancytopenia | 116 | |
| 17 | Muscle stiffnessc | Musculoskeletal stiffness | 272 | 17 | Organizing pneumonia | 104 | |
| 18 | Influenza | Influenza | 261 | Histiocytosis hematophagic | 104 | ||
| 19 | Infections | Infection | 241 | 19 | Pleurisy | 99 | |
| 20a | Tuberculosis | Tuberculosis | 236 | 20 | Platelet count decreased | 98 | |
| 21 | Stomatitis | Stomatitis | 218 | 21 | Urinary tract infection | 97 | |
| a | Pneumonia | Pneumonia | 218 | Disseminated tuberculosis | 97 | ||
| 23 | Asthma | Asthma | 181 | 23 | Disseminated intravascular coagulation | 94 | |
| 24 | Eczema | Eczema | 165 | 24 | Breast cancer | 88 | |
| 25 | Arthralgia | Arthralgia | 162 | 25 | Peritonitis | 87 | |
| 26 | Slight fever | Pyrexia | 147 | 26a | Tuberculosis | 86 | |
| 27 | Dizzy | Dizziness | 145 | Pyelonephritis | 86 | ||
| 28a | Interstitial pneumonia | Interstitial lung disease | 137 | 28 | Septic shock | 85 | |
| 29 | Numbness | Hypoesthesia | 132 | 29 | Neutrophil count decreased | 79 | |
| 30 | Hemorrhage | Hemorrhage | 116 | Gastric cancer | 79 | ||
| 31 | Depressed moodc | Depressed mood | 115 | ||||
| 32 | Constipation | Constipation | 115 | ||||
| 33 | Sufferingc | Sense of oppression | 106 | ||||
| 34 | Abdominal pain | Abdominal pain | 103 | ||||
| 35 | Diabetes mellitus | Diabetes mellitus | 100 | ||||
| 36 | Rash | Rash | 99 | ||||
| 37 | Moon facec | Cushingoid | 98 | ||||
| 38 | Edema | Edema | 96 | ||||
| 39 | Death | Death | 96 | ||||
| 40 | Itch | Pruritus | 95 | ||||
| 41a | Hepatic function abnormal | Hepatic function abnormal | 93 | ||||
| 42 | Urticaria | Urticaria | 92 | ||||
| 43 | Vomiting | Vomiting | 91 | ||||
| 44 | Physical deconditioning | Asthenia | 90 | ||||
| 45 | Hyperthermia | Hyperthermia | 89 | ||||
| 46 | Paroxysmal attackc | Seizure-like phenomena | 85 | ||||
| 47 | Cataract | Cataract | 84 | ||||
aEvents appearing in both databases (the TOBYO database and JADER database).
bNA (not applicable) in columns for MedDRA PTs (preferred terms) means there was no corresponding term in MedDRA.
cCoding discrepancies occurred between the 2 reviewers (the different suggestions from the reviewers are shown in parentheses): Adverse reaction (Adverse reaction or Adverse drug reaction), Muscle stiffness (Musculoskeletal stiffness or Muscle rigidity), Depressed mood (Depressed mood or Listless), Suffering (Sense of oppression or Emotional distress), Moon face (Cushingoid or Face edema), and Paroxysmal attack (Seizure-like phenomena or Seizure).
Figure 6Word cloud: visualization of words frequently observed in tōbyōki blogs of patients with depression.(a) English version translated from the original Japanese and (b) the original Japanese version.
Figure 7Word cloud: visualization of words frequently observed in tōbyōki blogs of patients with rheumatoid arthritis.(a) English version translated from the original Japanese and (b) the original Japanese version.
Figure 8Word co-occurrence network: visualization of words occurring with biological drugs in tōbyōki blogs of patients with rheumatoid arthritis.Because the original language is Japanese, English translations are shown together.