Literature DB >> 28224202

Germline-specific dgcr8 knockout in zebrafish using a BACK approach.

Yun Liu1,2, Zeyao Zhu2,3, Idy H T Ho2,4,3, Yujian Shi2,3, Yuxin Xie2,3, Jianzhen Li2,3, Yong Zhang1,2,5, Matthew T V Chan4, Christopher H K Cheng6,7.   

Abstract

Zebrafish is an important model to study developmental biology and human diseases. However, an effective approach to achieve spatial and temporal gene knockout in zebrafish has not been well established. In this study, we have developed a new approach, namely bacterial artificial chromosome-rescue-based knockout (BACK), to achieve conditional gene knockout in zebrafish using the Cre/loxP system. We have successfully deleted the DiGeorge syndrome critical region gene 8 (dgcr8) in zebrafish germ line and demonstrated that the maternal-zygotic dgcr8 (MZdgcr8) embryos exhibit MZdicer-like phenotypes with morphological defects which could be rescued by miR-430, indicating that canonical microRNAs play critical role in early development. Our findings establish that Cre/loxP-mediated tissue-specific gene knockout could be achieved using this BACK strategy and that canonical microRNAs play important roles in early embryonic development in zebrafish.

Entities:  

Keywords:  Crispr-cas9; Germ layer specification; Maternal-zygotic transition; Small regulatory RNAs

Mesh:

Substances:

Year:  2017        PMID: 28224202     DOI: 10.1007/s00018-017-2471-7

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  40 in total

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Journal:  Genesis       Date:  2000-02       Impact factor: 2.487

2.  Target protectors reveal dampening and balancing of Nodal agonist and antagonist by miR-430.

Authors:  Wen-Yee Choi; Antonio J Giraldez; Alexander F Schier
Journal:  Science       Date:  2007-08-30       Impact factor: 47.728

3.  Efficient targeted gene disruption in Xenopus embryos using engineered transcription activator-like effector nucleases (TALENs).

Authors:  Yong Lei; Xiaogang Guo; Yun Liu; Yang Cao; Yi Deng; Xiongfeng Chen; Christopher H K Cheng; Igor B Dawid; Yonglong Chen; Hui Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-08       Impact factor: 11.205

4.  CRISPR/Cas9 and TALEN-mediated knock-in approaches in zebrafish.

Authors:  Thomas O Auer; Filippo Del Bene
Journal:  Methods       Date:  2014-04-01       Impact factor: 3.608

Review 5.  Alternative miRNA biogenesis pathways and the interpretation of core miRNA pathway mutants.

Authors:  Jr-Shiuan Yang; Eric C Lai
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

6.  The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection.

Authors:  Alessandro Rosa; Francesca M Spagnoli; Ali H Brivanlou
Journal:  Dev Cell       Date:  2009-04       Impact factor: 12.270

7.  Precise Editing of the Zebrafish Genome Made Simple and Efficient.

Authors:  Kazuyuki Hoshijima; Michael J Jurynec; David Jonah Grunwald
Journal:  Dev Cell       Date:  2016-03-21       Impact factor: 12.270

8.  A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.

Authors:  Julien Ablain; Ellen M Durand; Song Yang; Yi Zhou; Leonard I Zon
Journal:  Dev Cell       Date:  2015-03-05       Impact factor: 12.270

9.  Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition.

Authors:  Miler T Lee; Ashley R Bonneau; Carter M Takacs; Ariel A Bazzini; Kate R DiVito; Elizabeth S Fleming; Antonio J Giraldez
Journal:  Nature       Date:  2013-09-22       Impact factor: 49.962

10.  Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos.

Authors:  Nannan Chang; Changhong Sun; Lu Gao; Dan Zhu; Xiufei Xu; Xiaojun Zhu; Jing-Wei Xiong; Jianzhong Jeff Xi
Journal:  Cell Res       Date:  2013-03-26       Impact factor: 25.617

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  7 in total

1.  Conditional mutagenesis by oligonucleotide-mediated integration of loxP sites in zebrafish.

Authors:  Leonard Burg; Nicholas Palmer; Khrievono Kikhi; Evgeniya S Miroshnik; Helen Rueckert; Eleanor Gaddy; Carlee MacPherson Cunningham; Kenny Mattonet; Shih-Lei Lai; Rubén Marín-Juez; Richard B Waring; Didier Y R Stainier; Darius Balciunas
Journal:  PLoS Genet       Date:  2018-11-14       Impact factor: 5.917

Review 2.  Versatile Genome Engineering Techniques Advance Human Ocular Disease Researches in Zebrafish.

Authors:  Si-Si Zheng; Ru-Yi Han; Lue Xiang; You-Yuan Zhuang; Zi-Bing Jin
Journal:  Front Cell Dev Biol       Date:  2018-07-12

3.  Spatiotemporal 22q11.21 Protein Network Implicates DGCR8-Dependent MicroRNA Biogenesis as a Risk for Late-Fetal Cortical Development in Psychiatric Diseases.

Authors:  Liang Chen; Wenxiang Cai; Weidi Wang; Zhe Liu; Guan Ning Lin
Journal:  Life (Basel)       Date:  2021-05-31

4.  Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus.

Authors:  George E Gentsch; Thomas Spruce; Rita S Monteiro; Nick D L Owens; Stephen R Martin; James C Smith
Journal:  Dev Cell       Date:  2018-02-22       Impact factor: 12.270

5.  Functional Characterization and Expression Analyses Show Differential Roles of Maternal and Zygotic Dgcr8 in Early Embryonic Development.

Authors:  Zeyao Zhu; Yun Liu; Wen Xu; Taian Liu; Yuxin Xie; Kathy W Y Sham; Ou Sha; Christopher H K Cheng
Journal:  Front Genet       Date:  2020-03-31       Impact factor: 4.599

6.  Circumventing Zygotic Lethality to Generate Maternal Mutants in Zebrafish.

Authors:  De-Li Shi
Journal:  Biology (Basel)       Date:  2022-01-10

7.  Rapid generation of maternal mutants via oocyte transgenic expression of CRISPR-Cas9 and sgRNAs in zebrafish.

Authors:  Chong Zhang; Tong Lu; Yizhuang Zhang; Jiaguang Li; Imran Tarique; Fenfen Wen; Aijun Chen; Jiasheng Wang; Zhuoyu Zhang; Yanjun Zhang; De-Li Shi; Ming Shao
Journal:  Sci Adv       Date:  2021-08-06       Impact factor: 14.136

  7 in total

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