Literature DB >> 28222324

Graph-based segmentation of abnormal nuclei in cervical cytology.

Ling Zhang1, Hui Kong2, Shaoxiong Liu3, Tianfu Wang4, Siping Chen5, Milan Sonka6.   

Abstract

A general method is reported for improving the segmentation of abnormal cell nuclei in cervical cytology images. In automation-assisted reading of cervical cytology, one of the essential steps is the segmentation of nuclei. Despite some progress, there is a need to improve the sensitivity, particularly the segmentation of abnormal nuclei. Our method starts with pre-segmenting the nucleus to define the coarse center and size of nucleus, which is used to construct a graph by image unfolding that maps ellipse-like border in the Cartesian coordinate system to lines in the polar coordinate system. The cost function jointly reflects properties of nucleus border and nucleus region. The prior constraints regarding the context of nucleus-cytoplasm position are utilized to modify the local cost functions. The globally optimal path in the constructed graph is then identified by dynamic programming with an iterative approach ensuring an optimal closed contour. Validation of our method was performed on abnormal nuclei from two cervical cell image datasets, Herlev and H&E stained manual liquid-based cytology (HEMLBC). Compared with five state-of-the-art approaches, our graph-search based method shows superior performance.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Abnormal nuclei; Cervical cells; Graph-based segmentation; Image cytometry; Segmentation

Mesh:

Year:  2017        PMID: 28222324      PMCID: PMC5777156          DOI: 10.1016/j.compmedimag.2017.01.002

Source DB:  PubMed          Journal:  Comput Med Imaging Graph        ISSN: 0895-6111            Impact factor:   4.790


  30 in total

1.  Automated detection of cell nuclei in pap smear images using morphological reconstruction and clustering.

Authors:  Marina E Plissiti; Christophoros Nikou; Antonia Charchanti
Journal:  IEEE Trans Inf Technol Biomed       Date:  2010-10-14

2.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

3.  Automation-assisted cervical cancer screening in manual liquid-based cytology with hematoxylin and eosin staining.

Authors:  Ling Zhang; Hui Kong; Chien Ting Chin; Shaoxiong Liu; Xinmin Fan; Tianfu Wang; Siping Chen
Journal:  Cytometry A       Date:  2013-12-20       Impact factor: 4.355

4.  Segmentation of cytoplasm and nuclei of abnormal cells in cervical cytology using global and local graph cuts.

Authors:  Ling Zhang; Hui Kong; Chien Ting Chin; Shaoxiong Liu; Zhi Chen; Tianfu Wang; Siping Chen
Journal:  Comput Med Imaging Graph       Date:  2014-02-21       Impact factor: 4.790

5.  Statistical methods for assessing agreement between two methods of clinical measurement.

Authors:  J M Bland; D G Altman
Journal:  Lancet       Date:  1986-02-08       Impact factor: 79.321

6.  Automated screening of cervical cytology specimens.

Authors:  G G Birdsong
Journal:  Hum Pathol       Date:  1996-05       Impact factor: 3.466

7.  Assisted primary screening using the automated ThinPrep Imaging System.

Authors:  Charles V Biscotti; Andrea E Dawson; Bruce Dziura; Luis Galup; Teresa Darragh; Amir Rahemtulla; Lisa Wills-Frank
Journal:  Am J Clin Pathol       Date:  2005-02       Impact factor: 2.493

8.  Automatic cervical cell segmentation and classification in Pap smears.

Authors:  Thanatip Chankong; Nipon Theera-Umpon; Sansanee Auephanwiriyakul
Journal:  Comput Methods Programs Biomed       Date:  2014-01-02       Impact factor: 5.428

9.  Automation-assisted versus manual reading of cervical cytology (MAVARIC): a randomised controlled trial.

Authors:  Henry C Kitchener; Roger Blanks; Graham Dunn; Lionel Gunn; Mina Desai; Rebecca Albrow; Jean Mather; Durgesh N Rana; Heather Cubie; Catherine Moore; Rosa Legood; Alastair Gray; Sue Moss
Journal:  Lancet Oncol       Date:  2010-12-09       Impact factor: 41.316

10.  Semiautomated segmentation of head and neck cancers in 18F-FDG PET scans: A just-enough-interaction approach.

Authors:  Reinhard R Beichel; Markus Van Tol; Ethan J Ulrich; Christian Bauer; Tangel Chang; Kristin A Plichta; Brian J Smith; John J Sunderland; Michael M Graham; Milan Sonka; John M Buatti
Journal:  Med Phys       Date:  2016-06       Impact factor: 4.071

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  2 in total

Review 1.  A Review of Computational Methods for Cervical Cells Segmentation and Abnormality Classification.

Authors:  Teresa Conceição; Cristiana Braga; Luís Rosado; Maria João M Vasconcelos
Journal:  Int J Mol Sci       Date:  2019-10-15       Impact factor: 5.923

2.  Cric searchable image database as a public platform for conventional pap smear cytology data.

Authors:  Mariana T Rezende; Raniere Silva; Fagner de O Bernardo; Alessandra H G Tobias; Paulo H C Oliveira; Tales M Machado; Caio S Costa; Fatima N S Medeiros; Daniela M Ushizima; Claudia M Carneiro; Andrea G C Bianchi
Journal:  Sci Data       Date:  2021-06-10       Impact factor: 6.444

  2 in total

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