Literature DB >> 28221022

Quantitative 13C Traces of Glucose Fate in Hepatitis B Virus-Infected Hepatocytes.

Qianfen Wan1, Yulan Wang2,3, Huiru Tang1.   

Abstract

Quantitative characterization of 13C-labeled metabolites is an important part of the stable isotope tracing method widely used in metabolic flux analysis. Given the long relaxation time and low sensitivity of 13C nuclei, direct measurement of 13C-labeled metabolites using one-dimensional 13C NMR often fails to meet the demand of metabolomics studies, especially with large numbers of samples and metabolites having low abundance. Although HSQC-based 2D NMR methods have improved sensitivity with inversion detection, they are time-consuming and thus unsuitable for high-throughput absolute quantification of 13C-labeled metabolites. In this study, we developed a method for absolute quantification of 13C-labeled metabolites using naturally abundant TSP as a reference with the first increment of the HMQC pulse sequence, taking polarization transfer efficiencies into consideration. We validated this method using a mixture of 13C-labeled alanine, methionine, glucose, and formic acid together with a mixture of alanine, lactate, glycine, uridine, cytosine, and hypoxanthine, which have natural 13C abundance with known concentrations. We subsequently applied this method to analyze the flux of glucose in HepG2 cells infected with hepatitis B virus (HBV). The results showed that HBV infection increased the cellular uptake of glucose, stimulated glycolysis, and enhanced the pentose phosphate and hexosamine pathways for biosynthesis of RNA and DNA and nucleotide sugars to facilitate HBV replication. This method saves experimental time and provides a possibility for absolute quantitative tracking of the 13C-labeled metabolites for high-throughput studies.

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Year:  2017        PMID: 28221022     DOI: 10.1021/acs.analchem.6b03200

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  6 in total

1.  NMR-Based Metabolomics in Cancer Research.

Authors:  Rui Hu; Tao Li; Yunhuang Yang; Yuan Tian; Limin Zhang
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Proteomic characterization of the natural history of chronic HBV infection revealed by tandem mass tag-based quantitative proteomics approach.

Authors:  Zhen Xun; Xiaobao Yao; Chenggong Zhu; Yuchen Ye; Songhang Wu; Tianbin Chen; Yongbin Zeng; Caorui Lin; Bin Yang; Qishui Ou; Can Liu
Journal:  Mater Today Bio       Date:  2022-05-25

3.  A framework for tracer-based metabolism in mammalian cells by NMR.

Authors:  Raquel Saborano; Zuhal Eraslan; Jennie Roberts; Farhat L Khanim; Patricia F Lalor; Michelle A C Reed; Ulrich L Günther
Journal:  Sci Rep       Date:  2019-02-21       Impact factor: 4.379

4.  Improved pharmacokinetics of tenofovir ester prodrugs strengthened the inhibition of HBV replication and the rebalance of hepatocellular metabolism in preclinical models.

Authors:  Xiaodan Hong; Zuhuan Cai; Fang Zhou; Xiaoliang Jin; Guangji Wang; Bingchen Ouyang; Jingwei Zhang
Journal:  Front Pharmacol       Date:  2022-08-29       Impact factor: 5.988

5.  White Spot Syndrome Virus Triggers a Glycolytic Pathway in Shrimp Immune Cells (Hemocytes) to Benefit Its Replication.

Authors:  Yen Siong Ng; Der-Yen Lee; Chun-Hung Liu; Cheng-Yi Tung; Shu-Ting He; Han-Ching Wang
Journal:  Front Immunol       Date:  2022-07-04       Impact factor: 8.786

Review 6.  Metabolomic Approaches to Study Chemical Exposure-Related Metabolism Alterations in Mammalian Cell Cultures.

Authors:  Aneta Balcerczyk; Christian Damblon; Bénédicte Elena-Herrmann; Baptiste Panthu; Gilles J P Rautureau
Journal:  Int J Mol Sci       Date:  2020-09-18       Impact factor: 5.923

  6 in total

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