Literature DB >> 28220336

MicroRNAs in model and complex organisms.

Hikmet Budak1, Baohong Zhang2.   

Abstract

Non-coding RNAs such as microRNAs (miRNAs) are very tiny ribonucleotides having an essential role in gene regulation at both post-transcriptional and translational levels. They are very conserved and expressed in worms, flies, plants, and mammals in a sequence-specific manner. Furthermore, it is now possible to clone miRNAs using the new genome editing tool CRISPR/cas9, which shows benefit in control of untargeted effect. In this special issue, we tried to cover researches associated with functional roles of miRNAs accross model and complex organisms.

Keywords:  CRISPR/Cas; Noncoding RNAs; Plant and human genome; miRNAs

Mesh:

Substances:

Year:  2017        PMID: 28220336     DOI: 10.1007/s10142-017-0544-1

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  37 in total

1.  Subgenomic analysis of microRNAs in polyploid wheat.

Authors:  Melda Kantar; Bala Anı Akpınar; Miroslav Valárik; Stuart J Lucas; Jaroslav Doležel; Pilar Hernández; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2012-05-17       Impact factor: 3.410

Review 2.  Getting to the root of miRNA-mediated gene silencing.

Authors:  Ana Eulalio; Eric Huntzinger; Elisa Izaurralde
Journal:  Cell       Date:  2008-01-11       Impact factor: 41.582

3.  Regulatory network analysis of microRNAs and genes in imatinib-resistant chronic myeloid leukemia.

Authors:  Ismael Soltani; Hanen Gharbi; Islem Ben Hassine; Ghada Bouguerra; Kais Douzi; Mouheb Teber; Salem Abbes; Samia Menif
Journal:  Funct Integr Genomics       Date:  2016-09-16       Impact factor: 3.410

4.  Harnessing NGS and Big Data Optimally: Comparison of miRNA Prediction from Assembled versus Non-assembled Sequencing Data--The Case of the Grass Aegilops tauschii Complex Genome.

Authors:  Hikmet Budak; Melda Kantar
Journal:  OMICS       Date:  2015-06-10

Review 5.  MicroRNA: a new target for improving plant tolerance to abiotic stress.

Authors:  Baohong Zhang
Journal:  J Exp Bot       Date:  2015-02-19       Impact factor: 6.992

6.  A syntenic locus on buffalo chromosome 20: novel genomic hotspot for miRNAs involved in follicular-luteal transition.

Authors:  Vijay Simha Baddela; Suneel Kumar Onteru; Dheer Singh
Journal:  Funct Integr Genomics       Date:  2016-11-19       Impact factor: 3.410

7.  Integrative analysis of signaling pathways and diseases associated with the miR-106b/25 cluster and their function study in berberine-induced multiple myeloma cells.

Authors:  Chunming Gu; Tianfu Li; Zhao Yin; Shengting Chen; Jia Fei; Jianping Shen; Yuan Zhang
Journal:  Funct Integr Genomics       Date:  2016-09-19       Impact factor: 3.410

Review 8.  The biomarker and therapeutic potential of miRNA in Alzheimer's disease.

Authors:  Lynn M Bekris; James B Leverenz
Journal:  Neurodegener Dis Manag       Date:  2015

9.  Water-deficit stress-responsive microRNAs and their targets in four durum wheat genotypes.

Authors:  Haipei Liu; Amanda J Able; Jason A Able
Journal:  Funct Integr Genomics       Date:  2016-08-25       Impact factor: 3.410

Review 10.  Abiotic stress miRNomes in the Triticeae.

Authors:  Burcu Alptekin; Peter Langridge; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2016-09-24       Impact factor: 3.410

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  12 in total

1.  Expansion and evolutionary patterns of GDSL-type esterases/lipases in Rosaceae genomes.

Authors:  Yunpeng Cao; Yahui Han; Dandan Meng; Muhammad Abdullah; Jiangliu Yu; Dahui Li; Qing Jin; Yi Lin; Yongping Cai
Journal:  Funct Integr Genomics       Date:  2018-06-13       Impact factor: 3.410

2.  Systematic analysis and comparison of the PHD-Finger gene family in Chinese pear (Pyrus bretschneideri) and its role in fruit development.

Authors:  Yunpeng Cao; Yahui Han; Dandan Meng; Muhammad Abdullah; Dahui Li; Qing Jin; Yi Lin; Yongping Cai
Journal:  Funct Integr Genomics       Date:  2018-04-20       Impact factor: 3.410

Review 3.  Plant and Animal microRNAs (miRNAs) and Their Potential for Inter-kingdom Communication.

Authors:  Yuhai Zhao; Lin Cong; Walter J Lukiw
Journal:  Cell Mol Neurobiol       Date:  2017-09-06       Impact factor: 5.046

4.  Identification of Fusarium graminearum-responsive miRNAs and their targets in wheat by sRNA sequencing and degradome analysis.

Authors:  Xiaojie Jin; Linlin Jia; Yongxia Wang; Baoquan Li; Dongfa Sun; Xueyan Chen
Journal:  Funct Integr Genomics       Date:  2019-07-13       Impact factor: 3.410

5.  Identification and molecular characterization of a trans-acting small interfering RNA producing locus regulating leaf rust responsive gene expression in wheat (Triticum aestivum L.).

Authors:  Summi Dutta; Dhananjay Kumar; Shailendra Jha; Kumble Vinod Prabhu; Manish Kumar; Kunal Mukhopadhyay
Journal:  Planta       Date:  2017-07-14       Impact factor: 4.116

6.  Nitrogen Starvation-Responsive MicroRNAs Are Affected by Transgenerational Stress in Durum Wheat Seedlings.

Authors:  Haipei Liu; Amanda J Able; Jason A Able
Journal:  Plants (Basel)       Date:  2021-04-21

7.  Differential expression of miRNAs in the presence of B chromosome in the cichlid fish Astatotilapia latifasciata.

Authors:  Jordana Inácio Nascimento-Oliveira; Bruno Evaristo Almeida Fantinatti; Ivan Rodrigo Wolf; Adauto Lima Cardoso; Erica Ramos; Nathalie Rieder; Rogerio de Oliveira; Cesar Martins
Journal:  BMC Genomics       Date:  2021-05-12       Impact factor: 3.969

Review 8.  Small RNA Mobility: Spread of RNA Silencing Effectors and its Effect on Developmental Processes and Stress Adaptation in Plants.

Authors:  Chiara Pagliarani; Giorgio Gambino
Journal:  Int J Mol Sci       Date:  2019-09-03       Impact factor: 5.923

9.  Small RNA, Transcriptome and Degradome Analysis of the Transgenerational Heat Stress Response Network in Durum Wheat.

Authors:  Haipei Liu; Amanda J Able; Jason A Able
Journal:  Int J Mol Sci       Date:  2021-05-24       Impact factor: 5.923

Review 10.  Plant Small Non-coding RNAs and Their Roles in Biotic Stresses.

Authors:  Eleanor J Brant; Hikmet Budak
Journal:  Front Plant Sci       Date:  2018-07-20       Impact factor: 5.753

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