Literature DB >> 28213833

Molecular Imaging in Synthetic Biology, and Synthetic Biology in Molecular Imaging.

Assaf A Gilad1,2,3, Mikhail G Shapiro4,5.   

Abstract

Biomedical synthetic biology is an emerging field in which cells are engineered at the genetic level to carry out novel functions with relevance to biomedical and industrial applications. This approach promises new treatments, imaging tools, and diagnostics for diseases ranging from gastrointestinal inflammatory syndromes to cancer, diabetes, and neurodegeneration. As these cellular technologies undergo pre-clinical and clinical development, it is becoming essential to monitor their location and function in vivo, necessitating appropriate molecular imaging strategies, and therefore, we have created an interest group within the World Molecular Imaging Society focusing on synthetic biology and reporter gene technologies. Here, we highlight recent advances in biomedical synthetic biology, including bacterial therapy, immunotherapy, and regenerative medicine. We then discuss emerging molecular imaging approaches to facilitate in vivo applications, focusing on reporter genes for noninvasive modalities such as magnetic resonance, ultrasound, photoacoustic imaging, bioluminescence, and radionuclear imaging. Because reporter genes can be incorporated directly into engineered genetic circuits, they are particularly well suited to imaging synthetic biological constructs, and developing them provides opportunities for creative molecular and genetic engineering.

Entities:  

Keywords:  Imaging; Reporter genes; Synthetic biology

Mesh:

Year:  2017        PMID: 28213833      PMCID: PMC6058969          DOI: 10.1007/s11307-017-1062-1

Source DB:  PubMed          Journal:  Mol Imaging Biol        ISSN: 1536-1632            Impact factor:   3.488


  73 in total

1.  Ultrafast ultrasound localization microscopy for deep super-resolution vascular imaging.

Authors:  Claudia Errico; Juliette Pierre; Sophie Pezet; Yann Desailly; Zsolt Lenkei; Olivier Couture; Mickael Tanter
Journal:  Nature       Date:  2015-11-26       Impact factor: 49.962

2.  Self-sufficient control of urate homeostasis in mice by a synthetic circuit.

Authors:  Christian Kemmer; Marc Gitzinger; Marie Daoud-El Baba; Valentin Djonov; Jörg Stelling; Martin Fussenegger
Journal:  Nat Biotechnol       Date:  2010-03-28       Impact factor: 54.908

Review 3.  Synthetic biology moving into the clinic.

Authors:  Warren C Ruder; Ting Lu; James J Collins
Journal:  Science       Date:  2011-09-02       Impact factor: 47.728

4.  Directed evolution of a magnetic resonance imaging contrast agent for noninvasive imaging of dopamine.

Authors:  Mikhail G Shapiro; Gil G Westmeyer; Philip A Romero; Jerzy O Szablowski; Benedict Küster; Ameer Shah; Christopher R Otey; Robert Langer; Frances H Arnold; Alan Jasanoff
Journal:  Nat Biotechnol       Date:  2010-02-28       Impact factor: 54.908

Review 5.  CRISPR-Cas systems for editing, regulating and targeting genomes.

Authors:  Jeffry D Sander; J Keith Joung
Journal:  Nat Biotechnol       Date:  2014-03-02       Impact factor: 54.908

6.  Image-guided, noninvasive, spatiotemporal control of gene expression.

Authors:  Roel Deckers; Bruno Quesson; Josette Arsaut; Sandrine Eimer; Franck Couillaud; Chrit T W Moonen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

7.  Violacein as a genetically-controlled, enzymatically amplified and photobleaching-resistant chromophore for optoacoustic bacterial imaging.

Authors:  Yuanyuan Jiang; Felix Sigmund; Josefine Reber; Xosé Luís Deán-Ben; Sarah Glasl; Moritz Kneipp; Héctor Estrada; Daniel Razansky; Vasilis Ntziachristos; Gil G Westmeyer
Journal:  Sci Rep       Date:  2015-06-19       Impact factor: 4.379

Review 8.  Advances in using MRI probes and sensors for in vivo cell tracking as applied to regenerative medicine.

Authors:  Amit K Srivastava; Deepak K Kadayakkara; Amnon Bar-Shir; Assaf A Gilad; Michael T McMahon; Jeff W M Bulte
Journal:  Dis Model Mech       Date:  2015-04-01       Impact factor: 5.758

9.  Development of Timd2 as a reporter gene for MRI.

Authors:  P Stephen Patrick; Tiago B Rodrigues; Mikko I Kettunen; Scott K Lyons; André A Neves; Kevin M Brindle
Journal:  Magn Reson Med       Date:  2015-05-15       Impact factor: 4.668

10.  Molecular imaging with engineered physiology.

Authors:  Mitul Desai; Adrian L Slusarczyk; Ashley Chapin; Mariya Barch; Alan Jasanoff
Journal:  Nat Commun       Date:  2016-12-02       Impact factor: 14.919

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  8 in total

Review 1.  Synthetic biomarkers: a twenty-first century path to early cancer detection.

Authors:  Gabriel A Kwong; Sharmistha Ghosh; Lena Gamboa; Christos Patriotis; Sudhir Srivastava; Sangeeta N Bhatia
Journal:  Nat Rev Cancer       Date:  2021-09-06       Impact factor: 60.716

Review 2.  Biomolecular MRI reporters: Evolution of new mechanisms.

Authors:  Arnab Mukherjee; Hunter C Davis; Pradeep Ramesh; George J Lu; Mikhail G Shapiro
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-06-03       Impact factor: 9.795

3.  Preparation of biogenic gas vesicle nanostructures for use as contrast agents for ultrasound and MRI.

Authors:  Anupama Lakshmanan; George J Lu; Arash Farhadi; Suchita P Nety; Martin Kunth; Audrey Lee-Gosselin; David Maresca; Raymond W Bourdeau; Melissa Yin; Judy Yan; Christopher Witte; Dina Malounda; F Stuart Foster; Leif Schröder; Mikhail G Shapiro
Journal:  Nat Protoc       Date:  2017-09-07       Impact factor: 13.491

4.  Genetic Encoding of Targeted Magnetic Resonance Imaging Contrast Agents for Tumor Imaging.

Authors:  Simone Schuerle; Maiko Furubayashi; Ava P Soleimany; Tinotenda Gwisai; Wei Huang; Christopher Voigt; Sangeeta N Bhatia
Journal:  ACS Synth Biol       Date:  2020-01-22       Impact factor: 5.110

Review 5.  Genetically encodable materials for non-invasive biological imaging.

Authors:  Arash Farhadi; Felix Sigmund; Gil Gregor Westmeyer; Mikhail G Shapiro
Journal:  Nat Mater       Date:  2021-02-01       Impact factor: 43.841

6.  Bioengineering of Genetically Encoded Gene Promoter Repressed by the Flavonoid Apigenin for Constructing Intracellular Sensor for Molecular Events.

Authors:  Nicole M Desmet; Kalyani Dhusia; Wenjie Qi; Andrea I Doseff; Sudin Bhattacharya; Assaf A Gilad
Journal:  Biosensors (Basel)       Date:  2021-04-28

7.  Safe harbor-targeted CRISPR-Cas9 homology-independent targeted integration for multimodality reporter gene-based cell tracking.

Authors:  John J Kelly; Moe Saee-Marand; Nivin N Nyström; Melissa M Evans; Yuanxin Chen; Francisco M Martinez; Amanda M Hamilton; John A Ronald
Journal:  Sci Adv       Date:  2021-01-20       Impact factor: 14.136

8.  Redesigned reporter gene for improved proton exchange-based molecular MRI contrast.

Authors:  Or Perlman; Hirotaka Ito; Assaf A Gilad; Michael T McMahon; E Antonio Chiocca; Hiroshi Nakashima; Christian T Farrar
Journal:  Sci Rep       Date:  2020-11-26       Impact factor: 4.379

  8 in total

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