Literature DB >> 28213542

Plant Community and Nitrogen Deposition as Drivers of Alpha and Beta Diversities of Prokaryotes in Reconstructed Oil Sand Soils and Natural Boreal Forest Soils.

Jacynthe Masse1, Cindy E Prescott2, Sébastien Renaut3, Yves Terrat4, Sue J Grayston2.   

Abstract

The Athabasca oil sand deposit is one of the largest single oil deposits in the world. Following surface mining, companies are required to restore soil-like profiles that can support the previous land capabilities. The objective of this study was to assess whether the soil prokaryotic alpha diversity (α-diversity) and β-diversity in oil sand soils reconstructed 20 to 30 years previously and planted to one of three vegetation types (coniferous or deciduous trees and grassland) were similar to those found in natural boreal forest soils subject to wildfire disturbance. Prokaryotic α-diversity and β-diversity were assessed using massively parallel sequencing of 16S rRNA genes. The β-diversity, but not the α-diversity, differed between reconstructed and natural soils. Bacteria associated with an oligotrophic lifestyle were more abundant in natural forest soils, whereas bacteria associated with a copiotrophic lifestyle were more abundant in reconstructed soils. Ammonia-oxidizing archaea were most abundant in reconstructed soils planted with grasses. Plant species were the main factor influencing α-diversity in natural and in reconstructed soils. Nitrogen deposition, pH, and plant species were the main factors influencing the β-diversity of the prokaryotic communities in natural and reconstructed soils. The results highlight the importance of nitrogen deposition and aboveground-belowground relationships in shaping soil microbial communities in natural and reconstructed soils.IMPORTANCE Covering over 800 km2, land disturbed by the exploitation of the oil sands in Canada has to be restored. Here, we take advantage of the proximity between these reconstructed ecosystems and the boreal forest surrounding the oil sand mining area to study soil microbial community structure and processes in both natural and nonnatural environments. By identifying key characteristics shaping the structure of soil microbial communities, this study improved our understanding of how vegetation, soil characteristics and microbial communities interact and drive soil functions.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  biodiversity; boreal forest soil; microbial community; nitrogen deposition; oil sands; plant community; soil microbiology; soil restoration

Mesh:

Substances:

Year:  2017        PMID: 28213542      PMCID: PMC5394306          DOI: 10.1128/AEM.03319-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  42 in total

1.  Oligotrophs versus copiotrophs.

Authors:  A L Koch
Journal:  Bioessays       Date:  2001-07       Impact factor: 4.345

Review 2.  Insights into extreme thermoacidophily based on genome analysis of Picrophilus torridus and other thermoacidophilic archaea.

Authors:  A Angelov; W Liebl
Journal:  J Biotechnol       Date:  2006-04-18       Impact factor: 3.307

3.  The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria.

Authors:  Graeme W Nicol; Sven Leininger; Christa Schleper; James I Prosser
Journal:  Environ Microbiol       Date:  2008-08-14       Impact factor: 5.491

4.  Beyond deforestation: restoring forests and ecosystem services on degraded lands.

Authors:  Robin L Chazdon
Journal:  Science       Date:  2008-06-13       Impact factor: 47.728

Review 5.  Micro-scale determinants of bacterial diversity in soil.

Authors:  Michiel Vos; Alexandra B Wolf; Sarah J Jennings; George A Kowalchuk
Journal:  FEMS Microbiol Rev       Date:  2013-05-09       Impact factor: 16.408

6.  Acidobacteria dominate the active bacterial communities of Arctic tundra with widely divergent winter-time snow accumulation and soil temperatures.

Authors:  Minna K Männistö; Emilia Kurhela; Marja Tiirola; Max M Häggblom
Journal:  FEMS Microbiol Ecol       Date:  2012-11-21       Impact factor: 4.194

7.  Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; James Huntley; Noah Fierer; Sarah M Owens; Jason Betley; Louise Fraser; Markus Bauer; Niall Gormley; Jack A Gilbert; Geoff Smith; Rob Knight
Journal:  ISME J       Date:  2012-03-08       Impact factor: 10.302

8.  UCHIME improves sensitivity and speed of chimera detection.

Authors:  Robert C Edgar; Brian J Haas; Jose C Clemente; Christopher Quince; Rob Knight
Journal:  Bioinformatics       Date:  2011-06-23       Impact factor: 6.937

9.  Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota.

Authors:  Eduard Vico Oton; Christopher Quince; Graeme W Nicol; James I Prosser; Cécile Gubry-Rangin
Journal:  ISME J       Date:  2015-07-03       Impact factor: 10.302

10.  Moss-cyanobacteria associations as biogenic sources of nitrogen in boreal forest ecosystems.

Authors:  Kathrin Rousk; Davey L Jones; Thomas H Deluca
Journal:  Front Microbiol       Date:  2013-06-17       Impact factor: 5.640

View more
  4 in total

1.  Fertilizing riparian forests: nutrient repletion across ecotones with trophic rewilding.

Authors:  Joseph K Bump
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-10-22       Impact factor: 6.237

2.  Unearthing Shifts in Microbial Communities Across a Soil Disturbance Gradient.

Authors:  Taylor J Seitz; Ursel M E Schütte; Devin M Drown
Journal:  Front Microbiol       Date:  2022-05-24       Impact factor: 6.064

3.  The impact of reconstructed soils following oil sands exploitation on aspen and its associated belowground microbiome.

Authors:  Franck Stefani; Nathalie Isabel; Marie-Josée Morency; Manuel Lamothe; Simon Nadeau; Denis Lachance; Edith H Y Li; Charles Greer; Étienne Yergeau; Bradley D Pinno; Armand Séguin
Journal:  Sci Rep       Date:  2018-02-09       Impact factor: 4.379

4.  Dataset of microbial community structure in alcohol sprayed banana associated with ripening process.

Authors:  Fenny Martha Dwivany; Fidya Syam; Husna Nugrahapraja; Ocky Karna Radjasa; Maelita Ramdani Moeis; Susumu Uchiyama
Journal:  Data Brief       Date:  2020-02-05
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.