Literature DB >> 28206708

Physiological, metabolic and biotechnological features of extremely thermophilic microorganisms.

James A Counts1, Benjamin M Zeldes1, Laura L Lee1, Christopher T Straub1, Michael W W Adams2, Robert M Kelly1.   

Abstract

The current upper thermal limit for life as we know it is approximately 120°C. Microorganisms that grow optimally at temperatures of 75°C and above are usually referred to as 'extreme thermophiles' and include both bacteria and archaea. For over a century, there has been great scientific curiosity in the basic tenets that support life in thermal biotopes on earth and potentially on other solar bodies. Extreme thermophiles can be aerobes, anaerobes, autotrophs, heterotrophs, or chemolithotrophs, and are found in diverse environments including shallow marine fissures, deep sea hydrothermal vents, terrestrial hot springs-basically, anywhere there is hot water. Initial efforts to study extreme thermophiles faced challenges with their isolation from difficult to access locales, problems with their cultivation in laboratories, and lack of molecular tools. Fortunately, because of their relatively small genomes, many extreme thermophiles were among the first organisms to be sequenced, thereby opening up the application of systems biology-based methods to probe their unique physiological, metabolic and biotechnological features. The bacterial genera Caldicellulosiruptor, Thermotoga and Thermus, and the archaea belonging to the orders Thermococcales and Sulfolobales, are among the most studied extreme thermophiles to date. The recent emergence of genetic tools for many of these organisms provides the opportunity to move beyond basic discovery and manipulation to biotechnologically relevant applications of metabolic engineering. WIREs Syst Biol Med 2017, 9:e1377. doi: 10.1002/wsbm.1377 For further resources related to this article, please visit the WIREs website.
© 2017 Wiley Periodicals, Inc.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28206708      PMCID: PMC5400732          DOI: 10.1002/wsbm.1377

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  167 in total

1.  Two modes of sulfite oxidation in the extremely thermophilic and acidophilic archaeon acidianus ambivalens

Authors: 
Journal:  Arch Microbiol       Date:  1999-08       Impact factor: 2.552

2.  Improved growth media and culture techniques for genetic analysis and assessment of biomass utilization by Caldicellulosiruptor bescii.

Authors:  Joel Farkas; Daehwan Chung; Minseok Cha; Jennifer Copeland; Philip Grayeski; Janet Westpheling
Journal:  J Ind Microbiol Biotechnol       Date:  2012-11-13       Impact factor: 3.346

3.  Degradation of high loads of crystalline cellulose and of unpretreated plant biomass by the thermophilic bacterium Caldicellulosiruptor bescii.

Authors:  Mirko Basen; Amanda M Rhaesa; Irina Kataeva; Cameron J Prybol; Israel M Scott; Farris L Poole; Michael W W Adams
Journal:  Bioresour Technol       Date:  2013-11-19       Impact factor: 9.642

4.  Characterization of hydrogenase from the hyperthermophilic archaebacterium, Pyrococcus furiosus.

Authors:  F O Bryant; M W Adams
Journal:  J Biol Chem       Date:  1989-03-25       Impact factor: 5.157

5.  Characterization of acetyl-CoA/propionyl-CoA carboxylase in Metallosphaera sedula. Carboxylating enzyme in the 3-hydroxypropionate cycle for autotrophic carbon fixation.

Authors:  Michael Hügler; Robert S Krieger; Martina Jahn; Georg Fuchs
Journal:  Eur J Biochem       Date:  2003-02

6.  Exploiting microbial hyperthermophilicity to produce an industrial chemical, using hydrogen and carbon dioxide.

Authors:  Matthew W Keller; Gerrit J Schut; Gina L Lipscomb; Angeli L Menon; Ifeyinwa J Iwuchukwu; Therese T Leuko; Michael P Thorgersen; William J Nixon; Aaron S Hawkins; Robert M Kelly; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-25       Impact factor: 11.205

7.  Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Authors:  C J Bult; O White; G J Olsen; L Zhou; R D Fleischmann; G G Sutton; J A Blake; L M FitzGerald; R A Clayton; J D Gocayne; A R Kerlavage; B A Dougherty; J F Tomb; M D Adams; C I Reich; R Overbeek; E F Kirkness; K G Weinstock; J M Merrick; A Glodek; J L Scott; N S Geoghagen; J C Venter
Journal:  Science       Date:  1996-08-23       Impact factor: 47.728

8.  Coupled enzymatic production of sulfite, thiosulfate, and hydrogen sulfide from sulfur: purification and properties of a sulfur oxygenase reductase from the facultatively anaerobic archaebacterium Desulfurolobus ambivalens.

Authors:  A Kletzin
Journal:  J Bacteriol       Date:  1989-03       Impact factor: 3.490

9.  Overcoming restriction as a barrier to DNA transformation in Caldicellulosiruptor species results in efficient marker replacement.

Authors:  Daehwan Chung; Joel Farkas; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2013-05-29       Impact factor: 6.040

10.  Cellulosic ethanol production via consolidated bioprocessing at 75 °C by engineered Caldicellulosiruptor bescii.

Authors:  Daehwan Chung; Minseok Cha; Elise N Snyder; James G Elkins; Adam M Guss; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2015-10-06       Impact factor: 6.040

View more
  9 in total

Review 1.  Archaea: An Agro-Ecological Perspective.

Authors:  Mayur G Naitam; Rajeev Kaushik
Journal:  Curr Microbiol       Date:  2021-05-21       Impact factor: 2.188

Review 2.  Rapid responses of plants to temperature changes.

Authors:  Catarina C Nievola; Camila P Carvalho; Victória Carvalho; Edson Rodrigues
Journal:  Temperature (Austin)       Date:  2017-11-09

3.  13C metabolic flux analysis of three divergent extremely thermophilic bacteria: Geobacillus sp. LC300, Thermus thermophilus HB8, and Rhodothermus marinus DSM 4252.

Authors:  Lauren T Cordova; Robert M Cipolla; Adti Swarup; Christopher P Long; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2017-10-14       Impact factor: 9.783

4.  Thermococcus kodakarensis provides a versatile hyperthermophilic archaeal platform for protein expression.

Authors:  Kristin A Scott; Sere A Williams; Thomas J Santangelo
Journal:  Methods Enzymol       Date:  2021-07-13       Impact factor: 1.600

5.  Thermophilic Chloroflexi Dominate in the Microbial Community Associated with Coal-Fire Gas Vents in the Kuznetsk Coal Basin, Russia.

Authors:  Vitaly V Kadnikov; Andrey V Mardanov; Alexey V Beletsky; Mikhail A Grigoriev; Olga V Karnachuk; Nikolai V Ravin
Journal:  Microorganisms       Date:  2021-04-28

Review 6.  Recent Development of Extremophilic Bacteria and Their Application in Biorefinery.

Authors:  Daochen Zhu; Wasiu Adewale Adebisi; Fiaz Ahmad; Sivasamy Sethupathy; Blessing Danso; Jianzhong Sun
Journal:  Front Bioeng Biotechnol       Date:  2020-06-12

7.  Correlating enzyme annotations with a large set of microbial growth temperatures reveals metabolic adaptations to growth at diverse temperatures.

Authors:  Martin K M Engqvist
Journal:  BMC Microbiol       Date:  2018-11-06       Impact factor: 3.605

8.  The biology of thermoacidophilic archaea from the order Sulfolobales.

Authors:  April M Lewis; Alejandra Recalde; Christopher Bräsen; James A Counts; Phillip Nussbaum; Jan Bost; Larissa Schocke; Lu Shen; Daniel J Willard; Tessa E F Quax; Eveline Peeters; Bettina Siebers; Sonja-Verena Albers; Robert M Kelly
Journal:  FEMS Microbiol Rev       Date:  2021-08-17       Impact factor: 16.408

9.  Development of an Effective 6-Methylpurine Counterselection Marker for Genetic Manipulation in Thermococcus barophilus.

Authors:  Tiphaine Birien; Axel Thiel; Ghislaine Henneke; Didier Flament; Yann Moalic; Mohamed Jebbar
Journal:  Genes (Basel)       Date:  2018-02-07       Impact factor: 4.096

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.