| Literature DB >> 28202010 |
Charles Fontaine1, Jean-Pierre Daurès2, Paul Landais2.
Abstract
BACKGROUND: Information and theory beyond copula concepts are essential to understand the dependence relationship between several marginal covariates distributions. In a therapeutic trial data scheme, most of the time, censoring occurs. That could lead to a biased interpretation of the dependence relationship between marginal distributions. Furthermore, it could result in a biased inference of the joint probability distribution function. A particular case is the cost-effectiveness analysis (CEA), which has shown its utility in many medico-economic studies and where censoring often occurs.Entities:
Keywords: Censored data; Copulas; Cost-effectiveness analysis; Parametric models; Subgroups analysis
Mesh:
Year: 2017 PMID: 28202010 PMCID: PMC5312518 DOI: 10.1186/s12874-017-0305-9
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
Scheme of the 27 data generated cases
| Generating copula | Costs distribution | Censoring level | DGP |
|---|---|---|---|
| Gaussian copula |
| 15% | DGP 1 |
|
| 30% | DGP 2 | |
| 70% | DGP 3 | ||
|
| 15% | DGP 4 | |
| 30% | DGP 5 | ||
| 70% | DGP 6 | ||
|
| 15% | DGP 7 | |
| 30% | DGP 8 | ||
| 70% | DGP 9 | ||
| Clayton copula |
| 15% | DGP 10 |
|
| 30% | DGP 11 | |
| 70% | DGP 12 | ||
|
| 15% | DGP 13 | |
| 30% | DGP 14 | ||
| 70% | DGP 15 | ||
|
| 15% | DGP 16 | |
| 30% | DGP 17 | ||
| 70% | DGP 18 | ||
| Gumbel copula |
| 15% | DGP 19 |
|
| 30% | DGP 20 | |
| 70% | DGP 21 | ||
|
| 15% | DGP 22 | |
| 30% | DGP 23 | ||
| 70% | DGP 24 | ||
|
| 15% | DGP 25 | |
| 30% | DGP 26 | ||
| 70% | DGP 27 |
Fig. 1Inference on Kendall’s tau according to the simulations. Dispersion of the estimated Kendall’s tau according to the censoring level around the theoretical value of tau used to generate data: 0.6
Information on the estimation of the Kendall’s tau for each censoring level
| Censoring level | Mean | Var | Min | Max |
|---|---|---|---|---|
| Censoring =0% | 0.6002 | 0.00019 | 0.5488 | 0.6476 |
| Censoring =15% | 0.6011 | 0.00024 | 0.5416 | 0.6539 |
| Censoring =30% | 0.6030 | 0.00035 | 0.5319 | 0.6648 |
| Censoring =70% | 0.6089 | 0.00146 | 0.4624 | 0.7257 |
The outputs of the 9 simulations with a censoring of 0% are joint together in the information on the first line and the same for simulations censored at 15% on the second line, 30% at the third line and 70% at the last line
Fig. 2Frequency of selection of parametric marginal distributions for costs from the deviance criteria for each data generating process (DGP). The black bar represents the selection of the Normal distribution, the dark-gray bar represents the selection of the Gamma distribution and the light-gray stands for a logNormal distribution
Frequency of choice of a copula for each DGP given 500 iterations for the three main copulas
| DGP | Gaussian | Clayton | Gumbel |
|---|---|---|---|
| copula | copula | copula | |
| DPG 1 |
| 0 | 40 |
| DGP 2 |
| 0 | 46 |
| DGP 3 | 25 | 94 |
|
| DGP 4 |
| 0 | 85 |
| DGP 5 |
| 0 | 71 |
| DGP 6 | 140 | 21 |
|
| DGP 7 |
| 0 | 27 |
| DGP 8 |
| 0 | 10 |
| DGP 9 |
| 10 | 229 |
| DGP 10 | 0 |
| 0 |
| DGP 11 | 0 |
| 0 |
| DGP 12 | 0 |
| 1 |
| DGP 13 | 18 |
| 0 |
| DGP 14 | 11 |
| 0 |
| DGP 15 | 68 |
| 61 |
| DGP 16 | 2 |
| 0 |
| DGP 17 | 6 |
| 1 |
| DGP 18 | 177 |
| 62 |
| DGP 19 | 2 | 0 |
|
| DGP 20 | 9 | 0 |
|
| DGP 21 | 1 | 9 |
|
| DGP 22 | 123 | 0 |
|
| DGP 23 | 109 | 0 |
|
| DGP 24 | 36 | 0 |
|
| DGP 25 | 80 | 0 |
|
| DGP 26 | 84 | 0 |
|
| DGP 27 | 121 | 0 |
|
The chosen copula is in bold font
Frequency of choice of copula for each DGP on 500 iterations beyond the three main copulas and intermediate copulas
| DGP | Gaussian | Student | Clayton | Gumbel | Frank | Joe |
|---|---|---|---|---|---|---|
| copula | copula | copula | copula | copula | copula | |
| DPG 1 | 7 | 45 | 6 | 25 |
| 2 |
| DGP 2 | 2 | 44 | 4 | 25 |
| 1 |
| DGP 3 | 4 | 54 | 4 | 17 |
| 0 |
| DGP 4 | 32 |
| 0 | 56 | 112 | 3 |
| DGP 5 | 26 |
| 0 | 59 | 120 | 4 |
| DGP 6 | 23 |
| 0 | 79 | 113 | 1 |
| DGP 7 | 47 |
| 1 | 45 | 38 | 26 |
| DGP 8 | 55 |
| 0 | 43 | 33 | 25 |
| DGP 9 | 55 |
| 0 | 56 | 37 | 24 |
| DGP 10 | 0 | 12 |
| 0 | 124 | 0 |
| DGP 11 | 0 | 17 |
| 0 | 111 | 0 |
| DGP 12 | 0 | 5 |
| 0 | 110 | 0 |
| DGP 13 | 0 |
| 56 | 0 | 17 | 0 |
| DGP 14 | 2 |
| 55 | 0 | 10 | 0 |
| DGP 15 | 1 |
| 58 | 0 | 10 | 0 |
| DGP 16 | 1 |
| 19 | 2 | 1 | 0 |
| DGP 17 | 2 |
| 18 | 0 | 4 | 0 |
| DGP 18 | 4 |
| 19 | 0 | 4 | 1 |
| DGP 19 | 0 | 18 | 0 | 110 |
| 176 |
| DGP 20 | 0 | 20 | 0 | 107 |
| 159 |
| DGP 21 | 0 | 17 | 0 | 109 |
| 172 |
| DGP 22 | 13 |
| 0 | 153 | 67 | 31 |
| DGP 23 | 19 |
| 0 | 157 | 58 | 35 |
| DGP 24 | 23 | 161 | 0 |
| 75 | 37 |
| DGP 25 | 32 |
| 0 | 177 | 13 | 80 |
| DGP 26 | 39 |
| 0 | 148 | 13 | 87 |
| DGP 27 | 37 |
| 0 | 167 | 17 | 69 |
The chosen copula is in bold font
Information gained in the analysis process for costs and QALY in both arms
| Modelisation process | Control arm | Acupuncture arm |
|---|---|---|
| Kendall’s tau | −0.1065 | −0.1232 |
| QALY distribution |
|
|
| Costs statistics |
|
|
|
|
| |
| Costs distribution |
|
|
| Selected copula family | Gaussian | Student (t) |
| Copula parameter | −0.1664 | −0.1923 |
Fig. 3Plot of INB versus λ for acupuncture for headaches in primary care example. λ stands for the willingness-to-pay for a unit of effectiveness
Information gained in the analysis process QALY in both arms, where an artificial censoring around 30 percents has been created
| Modelisation process | Control arm | Acupuncture arm |
|---|---|---|
| Kendall’s tau | −0.1388 | −0.1011 |
| QALY distribution |
|
|
| Selected copula family | Gaussian | Gaussian |
| Copula parameter | −0.2163 | −0.1582 |
Fig. 4Schema of the procedure to perform cost-effectiveness analysis using copulas as shown in this paper