Literature DB >> 28201750

Genetic epidemiology in kidney disease.

Hannah C Ainsworth1,2, Carl D Langefeld1,2, Barry I Freedman2,3.   

Abstract

Familial aggregation of chronic kidney disease and its component phenotypes-reduced glomerular filtration rate, proteinuria and renal histologic changes-has long been recognized. Rates of severe kidney disease are also known to differ markedly between populations based on ancestry. These epidemiologic observations support the existence of nephropathy susceptibility genes. Several molecular genetic technologies are now available to identify causative loci. The present article summarizes available strategies useful for identifying nephropathy susceptibility genes, including candidate gene association, family-based linkage, genome-wide association and admixture mapping (mapping by admixture linkage disequilibrium) approaches. Examples of loci detected using these techniques are provided. Epigenetic studies and future directions are also discussed. The identification of nephropathy susceptibility genes, coupled with modifiable environmental triggers impacting their function, is likely to improve risk prediction and transform care. Development of novel therapies to prevent progression of kidney disease will follow.
© The Author 2017. Published by Oxford University Press on behalf of ERA-EDTA. All rights reserved.

Entities:  

Keywords:  admixture mapping; chronic kidney disease; genetics; genome-wide association study; linkage analysis

Mesh:

Year:  2017        PMID: 28201750      PMCID: PMC5837632          DOI: 10.1093/ndt/gfw270

Source DB:  PubMed          Journal:  Nephrol Dial Transplant        ISSN: 0931-0509            Impact factor:   5.992


  54 in total

1.  Carnosine as a protective factor in diabetic nephropathy: association with a leucine repeat of the carnosinase gene CNDP1.

Authors:  Bart Janssen; Daniela Hohenadel; Paul Brinkkoetter; Verena Peters; Nina Rind; Christine Fischer; Ivan Rychlik; Marie Cerna; Marianna Romzova; Emile de Heer; Hans Baelde; Stephan J L Bakker; Mahmoud Zirie; Eric Rondeau; Peter Mathieson; Moin A Saleem; Jochen Meyer; Hannes Köppel; Sibylle Sauerhoefer; Claus R Bartram; Peter Nawroth; Hans-Peter Hammes; Benito A Yard; Johannes Zschocke; Fokko J van der Woude
Journal:  Diabetes       Date:  2005-08       Impact factor: 9.461

2.  Severely reduced production of klotho in human chronic renal failure kidney.

Authors:  N Koh; T Fujimori; S Nishiguchi; A Tamori; S Shiomi; T Nakatani; K Sugimura; T Kishimoto; S Kinoshita; T Kuroki; Y Nabeshima
Journal:  Biochem Biophys Res Commun       Date:  2001-02-02       Impact factor: 3.575

3.  Genetic variations in the gene encoding ELMO1 are associated with susceptibility to diabetic nephropathy.

Authors:  Atsuyuki Shimazaki; Yoshihiro Kawamura; Akio Kanazawa; Akihiro Sekine; Susumu Saito; Tatsuhiko Tsunoda; Daisuke Koya; Tetsuya Babazono; Yasushi Tanaka; Masafumi Matsuda; Koichi Kawai; Tomohiro Iiizumi; Masahito Imanishi; Toshihiro Shinosaki; Toru Yanagimoto; Minoru Ikeda; Shigeki Omachi; Atsunori Kashiwagi; Kohei Kaku; Yasuhiko Iwamoto; Ryuzou Kawamori; Ryuichi Kikkawa; Masatoshi Nakajima; Yusuke Nakamura; Shiro Maeda
Journal:  Diabetes       Date:  2005-04       Impact factor: 9.461

4.  SORBS1 gene, a new candidate for diabetic nephropathy: results from a multi-stage genome-wide association study in patients with type 1 diabetes.

Authors:  Marine Germain; Marcus G Pezzolesi; Niina Sandholm; Amy J McKnight; Katalin Susztak; Maria Lajer; Carol Forsblom; Michel Marre; Hans-Henrik Parving; Peter Rossing; Iiro Toppila; Jan Skupien; Ronan Roussel; Yi-An Ko; Nora Ledo; Lasse Folkersen; Mete Civelek; Alexander P Maxwell; David-Alexandre Tregouet; Per-Henrik Groop; Lise Tarnow; Samy Hadjadj
Journal:  Diabetologia       Date:  2014-12-06       Impact factor: 10.122

5.  JC polyoma virus interacts with APOL1 in African Americans with nondiabetic nephropathy.

Authors:  Jasmin Divers; Marina Núñez; Kevin P High; Mariana Murea; Michael V Rocco; Lijun Ma; Donald W Bowden; Pamela J Hicks; Mitzie Spainhour; David A Ornelles; Steven B Kleiboeker; Kara Duncan; Carl D Langefeld; Jolyn Turner; Barry I Freedman
Journal:  Kidney Int       Date:  2013-05-15       Impact factor: 10.612

6.  DNA hypermethylation and DNA hypomethylation is present at different loci in chronic kidney disease.

Authors:  Laura J Smyth; Gareth J McKay; Alexander P Maxwell; Amy Jayne McKnight
Journal:  Epigenetics       Date:  2013-11-19       Impact factor: 4.528

7.  Genetic association for renal traits among participants of African ancestry reveals new loci for renal function.

Authors:  Ching-Ti Liu; Maija K Garnaas; Adrienne Tin; Anna Kottgen; Nora Franceschini; Carmen A Peralta; Ian H de Boer; Xiaoning Lu; Elizabeth Atkinson; Jingzhong Ding; Michael Nalls; Daniel Shriner; Josef Coresh; Abdullah Kutlar; Kirsten Bibbins-Domingo; David Siscovick; Ermeg Akylbekova; Sharon Wyatt; Brad Astor; Josef Mychaleckjy; Man Li; Muredach P Reilly; Raymond R Townsend; Adebowale Adeyemo; Alan B Zonderman; Mariza de Andrade; Stephen T Turner; Thomas H Mosley; Tamara B Harris; Charles N Rotimi; Yongmei Liu; Sharon L R Kardia; Michele K Evans; Michael G Shlipak; Holly Kramer; Michael F Flessner; Albert W Dreisbach; Wolfram Goessling; L Adrienne Cupples; W Linda Kao; Caroline S Fox
Journal:  PLoS Genet       Date:  2011-09-08       Impact factor: 5.917

8.  Suppression of Klotho expression by protein-bound uremic toxins is associated with increased DNA methyltransferase expression and DNA hypermethylation.

Authors:  Chiao-Yin Sun; Shih-Chung Chang; Mai-Szu Wu
Journal:  Kidney Int       Date:  2012-01-11       Impact factor: 10.612

9.  Common variants in Mendelian kidney disease genes and their association with renal function.

Authors:  Afshin Parsa; Christian Fuchsberger; Anna Köttgen; Conall M O'Seaghdha; Cristian Pattaro; Mariza de Andrade; Daniel I Chasman; Alexander Teumer; Karlhans Endlich; Matthias Olden; Ming-Huei Chen; Adrienne Tin; Young J Kim; Daniel Taliun; Man Li; Mary Feitosa; Mathias Gorski; Qiong Yang; Claudia Hundertmark; Meredith C Foster; Nicole Glazer; Aaron Isaacs; Madhumathi Rao; Albert V Smith; Jeffrey R O'Connell; Maksim Struchalin; Toshiko Tanaka; Guo Li; Shih-Jen Hwang; Elizabeth J Atkinson; Kurt Lohman; Marilyn C Cornelis; Asa Johansson; Anke Tönjes; Abbas Dehghan; Vincent Couraki; Elizabeth G Holliday; Rossella Sorice; Zoltan Kutalik; Terho Lehtimäki; Tõnu Esko; Harshal Deshmukh; Sheila Ulivi; Audrey Y Chu; Federico Murgia; Stella Trompet; Medea Imboden; Barbara Kollerits; Giorgio Pistis; Tamara B Harris; Lenore J Launer; Thor Aspelund; Gudny Eiriksdottir; Braxton D Mitchell; Eric Boerwinkle; Helena Schmidt; Edith Hofer; Frank Hu; Ayse Demirkan; Ben A Oostra; Stephen T Turner; Jingzhong Ding; Jeanette S Andrews; Barry I Freedman; Franco Giulianini; Wolfgang Koenig; Thomas Illig; Angela Döring; H-Erich Wichmann; Lina Zgaga; Tatijana Zemunik; Mladen Boban; Cosetta Minelli; Heather E Wheeler; Wilmar Igl; Ghazal Zaboli; Sarah H Wild; Alan F Wright; Harry Campbell; David Ellinghaus; Ute Nöthlings; Gunnar Jacobs; Reiner Biffar; Florian Ernst; Georg Homuth; Heyo K Kroemer; Matthias Nauck; Sylvia Stracke; Uwe Völker; Henry Völzke; Peter Kovacs; Michael Stumvoll; Reedik Mägi; Albert Hofman; Andre G Uitterlinden; Fernando Rivadeneira; Yurii S Aulchenko; Ozren Polasek; Nick Hastie; Veronique Vitart; Catherine Helmer; Jie Jin Wang; Bénédicte Stengel; Daniela Ruggiero; Sven Bergmann; Mika Kähönen; Jorma Viikari; Tiit Nikopensius; Michael Province; Helen Colhoun; Alex Doney; Antonietta Robino; Bernhard K Krämer; Laura Portas; Ian Ford; Brendan M Buckley; Martin Adam; Gian-Andri Thun; Bernhard Paulweber; Margot Haun; Cinzia Sala; Paul Mitchell; Marina Ciullo; Peter Vollenweider; Olli Raitakari; Andres Metspalu; Colin Palmer; Paolo Gasparini; Mario Pirastu; J Wouter Jukema; Nicole M Probst-Hensch; Florian Kronenberg; Daniela Toniolo; Vilmundur Gudnason; Alan R Shuldiner; Josef Coresh; Reinhold Schmidt; Luigi Ferrucci; Cornelia M van Duijn; Ingrid Borecki; Sharon L R Kardia; Yongmei Liu; Gary C Curhan; Igor Rudan; Ulf Gyllensten; James F Wilson; Andre Franke; Peter P Pramstaller; Rainer Rettig; Inga Prokopenko; Jacqueline Witteman; Caroline Hayward; Paul M Ridker; Murielle Bochud; Iris M Heid; David S Siscovick; Caroline S Fox; W Linda Kao; Carsten A Böger
Journal:  J Am Soc Nephrol       Date:  2013-09-12       Impact factor: 10.121

10.  Elevated Klotho promoter methylation is associated with severity of chronic kidney disease.

Authors:  Jing Chen; Xiaoyan Zhang; Han Zhang; Jing Lin; Chen Zhang; Qing Wu; Xiaoqiang Ding
Journal:  PLoS One       Date:  2013-11-05       Impact factor: 3.240

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  4 in total

1.  Genome-wide association studies suggest that APOL1-environment interactions more likely trigger kidney disease in African Americans with nondiabetic nephropathy than strong APOL1-second gene interactions.

Authors:  Carl D Langefeld; Mary E Comeau; Maggie C Y Ng; Meijian Guan; Latchezar Dimitrov; Poorva Mudgal; Mitzie H Spainhour; Bruce A Julian; Jeffrey C Edberg; Jennifer A Croker; Jasmin Divers; Pamela J Hicks; Donald W Bowden; Gary C Chan; Lijun Ma; Nicholette D Palmer; Robert P Kimberly; Barry I Freedman
Journal:  Kidney Int       Date:  2018-06-07       Impact factor: 10.612

Review 2.  Genetics, Genomics, and Precision Medicine in End-Stage Kidney Disease.

Authors:  Jeffrey B Kopp; Cheryl A Winkler
Journal:  Semin Nephrol       Date:  2018-07       Impact factor: 5.299

Review 3.  At the Research-Clinical Interface: Returning Individual Genetic Results to Research Participants.

Authors:  Kathleen M West; Erika Blacksher; Kerri L Cavanaugh; Stephanie M Fullerton; Ebele M Umeukeje; Bessie A Young; Wylie Burke
Journal:  Clin J Am Soc Nephrol       Date:  2020-02-10       Impact factor: 8.237

4.  Aging and End Stage Renal Disease Cause A Decrease in Absolute Circulating Lymphocyte Counts with A Shift to A Memory Profile and Diverge in Treg Population.

Authors:  Geraldo Rubens Ramos Freitas; Maria da Luz Fernandes; Fabiana Agena; Omar Jaluul; Sérgio Colenci Silva; Francine Brambate Carvalhinho Lemos; Verônica Coelho; David-Neto Elias; Nelson Zocoler Galante
Journal:  Aging Dis       Date:  2019-02-01       Impact factor: 6.745

  4 in total

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