Literature DB >> 25476525

SORBS1 gene, a new candidate for diabetic nephropathy: results from a multi-stage genome-wide association study in patients with type 1 diabetes.

Marine Germain1, Marcus G Pezzolesi, Niina Sandholm, Amy J McKnight, Katalin Susztak, Maria Lajer, Carol Forsblom, Michel Marre, Hans-Henrik Parving, Peter Rossing, Iiro Toppila, Jan Skupien, Ronan Roussel, Yi-An Ko, Nora Ledo, Lasse Folkersen, Mete Civelek, Alexander P Maxwell, David-Alexandre Tregouet, Per-Henrik Groop, Lise Tarnow, Samy Hadjadj.   

Abstract

AIMS/HYPOTHESIS: The genetic determinants of diabetic nephropathy remain poorly understood. We aimed to identify novel susceptibility genes for diabetic nephropathy.
METHODS: We performed a genome-wide association study using 1000 Genomes-based imputation to compare type 1 diabetic nephropathy cases with proteinuria and with or without renal failure with control patients who have had diabetes for more than 15 years and no evidence of renal disease.
RESULTS: None of the single nucleotide polymorphisms (SNPs) tested in a discovery cohort composed of 683 cases and 779 controls reached genome-wide statistical significance. The 46 top hits (p < 10(-5)) were then sought for first-stage analysis in the Genetics of Kidneys in Diabetes US (US-GoKinD) study, an independent population of 820 cases and 885 controls. Two SNPs in strong linkage disequilibrium with each other and located in the SORBS1 gene were consistently and significantly (p < 10(-4)) associated with diabetic nephropathy. The minor rs1326934-C allele was less frequent in cases than in controls (0.34 vs 0.43) and was associated with a decreased risk for diabetic nephropathy (OR 0.70; 95% CI 0.60, 0.82). However, this association was not observed in a second stage with two additional diabetic nephropathy cohorts, the All Ireland-Warren 3-Genetics of Kidneys in Diabetes UK and Republic of Ireland (UK-ROI; p = 0.15) and the Finnish Diabetic Nephropathy (FinnDiane; p = 0.44) studies, totalling 2,142 cases and 2,494 controls. Altogether, the random-effect meta-analysed rs1326934-C allele OR for diabetic nephropathy was 0.83 (95% CI 0.72, 0.96; p = 0.009). CONCLUSIONS/
INTERPRETATION: These data suggest that SORBS1 might be a gene involved in diabetic nephropathy.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25476525      PMCID: PMC5438751          DOI: 10.1007/s00125-014-3459-6

Source DB:  PubMed          Journal:  Diabetologia        ISSN: 0012-186X            Impact factor:   10.122


  11 in total

1.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

Review 2.  The tubulointerstitium in progressive diabetic kidney disease: more than an aftermath of glomerular injury?

Authors:  R E Gilbert; M E Cooper
Journal:  Kidney Int       Date:  1999-11       Impact factor: 10.612

3.  Association of genetic risk variants with expression of proximal genes identifies novel susceptibility genes for cardiovascular disease.

Authors:  Lasse Folkersen; Ferdinand van't Hooft; Ekaterina Chernogubova; Hanna E Agardh; Göran K Hansson; Ulf Hedin; Jan Liska; Ann-Christine Syvänen; Gabrielle Paulsson-Berne; Gabrielle Paulssson-Berne; Anders Franco-Cereceda; Anders Hamsten; Anders Gabrielsen; Per Eriksson
Journal:  Circ Cardiovasc Genet       Date:  2010-06-19

4.  Population-based assessment of familial clustering of diabetic nephropathy in type 1 diabetes.

Authors:  Valma Harjutsalo; Shuichi Katoh; Cinzia Sarti; Naoko Tajima; Jaakko Tuomilehto
Journal:  Diabetes       Date:  2004-09       Impact factor: 9.461

5.  GWAMA: software for genome-wide association meta-analysis.

Authors:  Reedik Mägi; Andrew P Morris
Journal:  BMC Bioinformatics       Date:  2010-05-28       Impact factor: 3.169

6.  Identification of CAD candidate genes in GWAS loci and their expression in vascular cells.

Authors:  Ayca Erbilgin; Mete Civelek; Casey E Romanoski; Calvin Pan; Raffi Hagopian; Judith A Berliner; Aldons J Lusis
Journal:  J Lipid Res       Date:  2013-05-10       Impact factor: 5.922

7.  New susceptibility loci associated with kidney disease in type 1 diabetes.

Authors:  Niina Sandholm; Rany M Salem; Amy Jayne McKnight; Eoin P Brennan; Carol Forsblom; Tamara Isakova; Gareth J McKay; Winfred W Williams; Denise M Sadlier; Ville-Petteri Mäkinen; Elizabeth J Swan; Cameron Palmer; Andrew P Boright; Emma Ahlqvist; Harshal A Deshmukh; Benjamin J Keller; Huateng Huang; Aila J Ahola; Emma Fagerholm; Daniel Gordin; Valma Harjutsalo; Bing He; Outi Heikkilä; Kustaa Hietala; Janne Kytö; Päivi Lahermo; Markku Lehto; Raija Lithovius; Anne-May Osterholm; Maija Parkkonen; Janne Pitkäniemi; Milla Rosengård-Bärlund; Markku Saraheimo; Cinzia Sarti; Jenny Söderlund; Aino Soro-Paavonen; Anna Syreeni; Lena M Thorn; Heikki Tikkanen; Nina Tolonen; Karl Tryggvason; Jaakko Tuomilehto; Johan Wadén; Geoffrey V Gill; Sarah Prior; Candace Guiducci; Daniel B Mirel; Andrew Taylor; S Mohsen Hosseini; Hans-Henrik Parving; Peter Rossing; Lise Tarnow; Claes Ladenvall; François Alhenc-Gelas; Pierre Lefebvre; Vincent Rigalleau; Ronan Roussel; David-Alexandre Tregouet; Anna Maestroni; Silvia Maestroni; Henrik Falhammar; Tianwei Gu; Anna Möllsten; Danut Cimponeriu; Mihai Ioana; Maria Mota; Eugen Mota; Cristian Serafinceanu; Monica Stavarachi; Robert L Hanson; Robert G Nelson; Matthias Kretzler; Helen M Colhoun; Nicolae Mircea Panduru; Harvest F Gu; Kerstin Brismar; Gianpaolo Zerbini; Samy Hadjadj; Michel Marre; Leif Groop; Maria Lajer; Shelley B Bull; Daryl Waggott; Andrew D Paterson; David A Savage; Stephen C Bain; Finian Martin; Joel N Hirschhorn; Catherine Godson; Jose C Florez; Per-Henrik Groop; Alexander P Maxwell
Journal:  PLoS Genet       Date:  2012-09-20       Impact factor: 5.917

8.  Transcriptome analysis of human diabetic kidney disease.

Authors:  Karolina I Woroniecka; Ae Seo Deok Park; Davoud Mohtat; David B Thomas; James M Pullman; Katalin Susztak
Journal:  Diabetes       Date:  2011-07-13       Impact factor: 9.461

9.  Targeted proteomics of isolated glomeruli from the kidneys of diabetic rats: sorbin and SH3 domain containing 2 is a novel protein associated with diabetic nephropathy.

Authors:  Shinya Nakatani; Anna Kakehashi; Eiji Ishimura; Shotaro Yamano; Katsuhito Mori; Min Wei; Masaaki Inaba; Hideki Wanibuchi
Journal:  Exp Diabetes Res       Date:  2011-10-05

10.  Genome-wide association scan for diabetic nephropathy susceptibility genes in type 1 diabetes.

Authors:  Marcus G Pezzolesi; G David Poznik; Josyf C Mychaleckyj; Andrew D Paterson; Michelle T Barati; Jon B Klein; Daniel P K Ng; Grzegorz Placha; Luis H Canani; Jacek Bochenski; Daryl Waggott; Michael L Merchant; Bozena Krolewski; Lucia Mirea; Krzysztof Wanic; Pisut Katavetin; Masahiko Kure; Pawel Wolkow; Jonathon S Dunn; Adam Smiles; William H Walker; Andrew P Boright; Shelley B Bull; Alessandro Doria; John J Rogus; Stephen S Rich; James H Warram; Andrzej S Krolewski
Journal:  Diabetes       Date:  2009-02-27       Impact factor: 9.461

View more
  16 in total

Review 1.  Progress in Defining the Genetic Basis of Diabetic Complications.

Authors:  Emma Dahlström; Niina Sandholm
Journal:  Curr Diab Rep       Date:  2017-09       Impact factor: 4.810

Review 2.  Genetics of diabetic nephropathy: a long road of discovery.

Authors:  Amy Jayne McKnight; Seamus Duffy; Alexander P Maxwell
Journal:  Curr Diab Rep       Date:  2015-07       Impact factor: 4.810

Review 3.  The genetics of diabetic complications.

Authors:  Emma Ahlqvist; Natalie R van Zuydam; Leif C Groop; Mark I McCarthy
Journal:  Nat Rev Nephrol       Date:  2015-03-31       Impact factor: 28.314

Review 4.  Precision Medicine Approaches to Diabetic Kidney Disease: Tissue as an Issue.

Authors:  Caroline Gluck; Yi-An Ko; Katalin Susztak
Journal:  Curr Diab Rep       Date:  2017-05       Impact factor: 4.810

5.  Cohort Profile: Scottish Diabetes Research Network Type 1 Bioresource Study (SDRNT1BIO).

Authors:  Tahira Akbar; Stuart McGurnaghan; Colin N A Palmer; Shona J Livingstone; John Petrie; John Chalmers; Robert S Lindsay; John A McKnight; Donald W M Pearson; Alan W Patrick; James Walker; Helen C Looker; Helen M Colhoun
Journal:  Int J Epidemiol       Date:  2017-06-01       Impact factor: 7.196

Review 6.  Genetics and Epigenetics of Diabetic Nephropathy.

Authors:  Ruijie Liu; Kyung Lee; John Cijiang He
Journal:  Kidney Dis (Basel)       Date:  2015-04-16

7.  Novel Genetic Actors of Diabetes-Associated Microvascular Complications: Retinopathy, Kidney Disease and Neuropathy.

Authors:  Samaneh Davoudi; Lucia Sobrin
Journal:  Rev Diabet Stud       Date:  2016-01-25

Review 8.  Genetic epidemiology in kidney disease.

Authors:  Hannah C Ainsworth; Carl D Langefeld; Barry I Freedman
Journal:  Nephrol Dial Transplant       Date:  2017-04-01       Impact factor: 5.992

Review 9.  Lessons from CKD-Related Genetic Association Studies-Moving Forward.

Authors:  Sophie Limou; Nicolas Vince; Afshin Parsa
Journal:  Clin J Am Soc Nephrol       Date:  2017-12-14       Impact factor: 8.237

10.  The Genetic Landscape of Renal Complications in Type 1 Diabetes.

Authors:  Niina Sandholm; Natalie Van Zuydam; Emma Ahlqvist; Thorhildur Juliusdottir; Harshal A Deshmukh; N William Rayner; Barbara Di Camillo; Carol Forsblom; Joao Fadista; Daniel Ziemek; Rany M Salem; Linda T Hiraki; Marcus Pezzolesi; David Trégouët; Emma Dahlström; Erkka Valo; Nikolay Oskolkov; Claes Ladenvall; M Loredana Marcovecchio; Jason Cooper; Francesco Sambo; Alberto Malovini; Marco Manfrini; Amy Jayne McKnight; Maria Lajer; Valma Harjutsalo; Daniel Gordin; Maija Parkkonen; Jaakko Tuomilehto; Valeriya Lyssenko; Paul M McKeigue; Stephen S Rich; Mary Julia Brosnan; Eric Fauman; Riccardo Bellazzi; Peter Rossing; Samy Hadjadj; Andrzej Krolewski; Andrew D Paterson; Jose C Florez; Joel N Hirschhorn; Alexander P Maxwell; David Dunger; Claudio Cobelli; Helen M Colhoun; Leif Groop; Mark I McCarthy; Per-Henrik Groop
Journal:  J Am Soc Nephrol       Date:  2016-09-19       Impact factor: 10.121

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.