Literature DB >> 28198185

IRMPD Spectroscopy Sheds New (Infrared) Light on the Sulfate Pattern of Carbohydrates.

B Schindler1, L Barnes1, C J Gray2, S Chambert3, S L Flitsch2, J Oomens4,5, R Daniel6, A R Allouche1, I Compagnon1,7.   

Abstract

IR spectroscopy of gas-phase ions is proposed to resolve positional isomers of sulfated carbohydrates. Mass spectrometric fingerprints and gas-phase vibrational spectra in the near and mid-IR regions were obtained for sulfated monosaccharides, yielding unambiguous signatures of sulfated isomers. We report the first systematic exploration of the biologically relevant but notoriously challenging deprotonated state in the near IR region. Remarkably, anions displayed very atypical vibrational profiles, which challenge the well-established DFT (Density Functionnal Theory) modeling. The proposed approach was used to elucidate the sulfate patterns in glycosaminoglycans, a ubiquitous class of mammalian carbohydrates, which is regarded as a major challenge in carbohydrate structural analysis. Isomeric glycosaminoglycan disaccharides from heparin and chondroitin sources were resolved, highlighting the potential of infrared multiple photon dissociation spectroscopy as a novel structural tool for carbohydrates.

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Year:  2017        PMID: 28198185     DOI: 10.1021/acs.jpca.6b11642

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  17 in total

1.  Glycosaminoglycan Analysis by Cryogenic Messenger-Tagging IR Spectroscopy Combined with IMS-MS.

Authors:  Neelam Khanal; Chiara Masellis; Michael Z Kamrath; David E Clemmer; Thomas R Rizzo
Journal:  Anal Chem       Date:  2017-07-07       Impact factor: 6.986

2.  Analysis of Sulfate Patterns in Glycosaminoglycan Oligosaccharides by MSn Coupled to Infrared Ion Spectroscopy: the Case of GalNAc4S and GalNAc6S.

Authors:  G Renois-Predelus; B Schindler; I Compagnon
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-26       Impact factor: 3.109

3.  Structural and Energetic Effects of O2'-Ribose Methylation of Protonated Pyrimidine Nucleosides.

Authors:  C C He; L A Hamlow; Y Zhu; Y-W Nei; L Fan; C P McNary; P Maître; V Steinmetz; B Schindler; I Compagnon; P B Armentrout; M T Rodgers
Journal:  J Am Soc Mass Spectrom       Date:  2019-08-21       Impact factor: 3.109

4.  Cryogenic Vibrational Spectroscopy Provides Unique Fingerprints for Glycan Identification.

Authors:  Chiara Masellis; Neelam Khanal; Michael Z Kamrath; David E Clemmer; Thomas R Rizzo
Journal:  J Am Soc Mass Spectrom       Date:  2017-06-22       Impact factor: 3.109

Review 5.  Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.

Authors:  Márkó Grabarics; Maike Lettow; Carla Kirschbaum; Kim Greis; Christian Manz; Kevin Pagel
Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

6.  Cryogenic IR spectroscopy combined with ion mobility spectrometry for the analysis of human milk oligosaccharides.

Authors:  Neelam Khanal; Chiara Masellis; Michael Z Kamrath; David E Clemmer; Thomas R Rizzo
Journal:  Analyst       Date:  2018-04-16       Impact factor: 4.616

7.  Rapid Differentiation of Chondroitin Sulfate Isomers by Gas-phase Hydrogen-deuterium Exchange.

Authors:  Kimberly M Alonge; Rick Harkewicz; Miklos Guttman
Journal:  Curr Mol Med       Date:  2020       Impact factor: 2.222

Review 8.  Advancing Solutions to the Carbohydrate Sequencing Challenge.

Authors:  Christopher J Gray; Lukasz G Migas; Perdita E Barran; Kevin Pagel; Peter H Seeberger; Claire E Eyers; Geert-Jan Boons; Nicola L B Pohl; Isabelle Compagnon; Göran Widmalm; Sabine L Flitsch
Journal:  J Am Chem Soc       Date:  2019-08-21       Impact factor: 16.383

9.  Anomeric memory of the glycosidic bond upon fragmentation and its consequences for carbohydrate sequencing.

Authors:  Baptiste Schindler; Loïc Barnes; Gina Renois; Christopher Gray; Stéphane Chambert; Sébastien Fort; Sabine Flitsch; Claire Loison; Abdul-Rahman Allouche; Isabelle Compagnon
Journal:  Nat Commun       Date:  2017-10-17       Impact factor: 14.919

Review 10.  Analysis of the Glycosaminoglycan Chains of Proteoglycans.

Authors:  Yuefan Song; Fuming Zhang; Robert J Linhardt
Journal:  J Histochem Cytochem       Date:  2020-07-06       Impact factor: 2.479

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