Literature DB >> 2819045

Binding of dimethyl sulfoxide to lysozyme in crystals, studied with neutron diffraction.

M S Lehmann1, R F Stansfield.   

Abstract

Crystals of hen egg white lysozyme soaked in 15% (v/v) dimethyl sulfoxide have been studied with single-crystal neutron diffraction to determine the effect of the solvent molecules on the protein configuration. A total of 9423 statistically significant Bragg reflections to a resolution of approximately 1.8 A were used to locate 6 dimethyl sulfoxide molecules, and structure refinements including a model for the flat solvent lead to a final crystallographic agreement factor of 0.130. The mode of location of the dimethyl sulfoxide molecules was compared with that in previous studies employing ethanol. This showed that hydrophobic interactions can be an essential factor in fixing the probe molecules on the protein surface. There was, however, no sign of any significant change in the protein configuration; so although possibly at higher concentrations of dimethyl sulfoxide the protein will unfold, there was no indication of any precursor effect.

Entities:  

Mesh:

Substances:

Year:  1989        PMID: 2819045     DOI: 10.1021/bi00443a037

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  Use of organic solvents and small molecules for locating binding sites on proteins in solutions.

Authors:  C Dalvit; P Floersheim; M Zurini; A Widmer
Journal:  J Biomol NMR       Date:  1999-05       Impact factor: 2.835

2.  Solvent dependence of dynamic transitions in protein solutions.

Authors:  V Réat; R Dunn; M Ferrand; J L Finney; R M Daniel; J C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

3.  The effect of denaturants on protein structure.

Authors:  J Dunbar; H P Yennawar; S Banerjee; J Luo; G K Farber
Journal:  Protein Sci       Date:  1997-08       Impact factor: 6.725

4.  Protein hydration in solution: experimental observation by x-ray and neutron scattering.

Authors:  D I Svergun; S Richard; M H Koch; Z Sayers; S Kuprin; G Zaccai
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

5.  Dimethyl sulfoxide binding to globular proteins: a nuclear magnetic relaxation dispersion study.

Authors:  H Jóhannesson; V P Denisov; B Halle
Journal:  Protein Sci       Date:  1997-08       Impact factor: 6.725

6.  Hydrogen/Deuterium Exchange Behavior During Denaturing/Refolding Processes Determined in Tetragonal Hen Egg-White Lysozyme Crystals.

Authors:  Akiko Kita; Yukio Morimoto
Journal:  Mol Biotechnol       Date:  2022-01-13       Impact factor: 2.695

7.  Robust identification of binding hot spots using continuum electrostatics: application to hen egg-white lysozyme.

Authors:  David H Hall; Laurie E Grove; Christine Yueh; Chi Ho Ngan; Dima Kozakov; Sandor Vajda
Journal:  J Am Chem Soc       Date:  2011-12-01       Impact factor: 15.419

8.  Hot spots in a network of functional sites.

Authors:  Pemra Ozbek; Seren Soner; Turkan Haliloglu
Journal:  PLoS One       Date:  2013-09-02       Impact factor: 3.240

9.  Structural study of a small molecule receptor bound to dimethyllysine in lysozyme.

Authors:  Róise E McGovern; Brendan D Snarr; Joseph A Lyons; James McFarlane; Amanda L Whiting; Irina Paci; Fraser Hof; Peter B Crowley
Journal:  Chem Sci       Date:  2015-01-01       Impact factor: 9.825

Review 10.  Fifteen years of the Protein Crystallography Station: the coming of age of macromolecular neutron crystallography.

Authors:  Julian C-H Chen; Clifford J Unkefer
Journal:  IUCrJ       Date:  2017-01-01       Impact factor: 4.769

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.