Literature DB >> 28179550

The coupon collector urn model with unequal probabilities in ecology and evolution.

N Zoroa1, E Lesigne2, M J Fernández-Sáez3, P Zoroa3, J Casas4.   

Abstract

The sequential sampling of populations with unequal probabilities and with replacement in a closed population is a recurrent problem in ecology and evolution. Examples range from biodiversity sampling, epidemiology to the estimation of signal repertoire in animal communication. Many of these questions can be reformulated as urn problems, often as special cases of the coupon collector problem, most simply expressed as the number of coupons that must be collected to have a complete set. We aimed to apply the coupon collector model in a comprehensive manner to one example-hosts (balls) being searched (draws) and parasitized (ball colour change) by parasitic wasps-to evaluate the influence of differences in sampling probabilities between items on collection speed. Based on the model of a complete multinomial process over time, we define the distribution, distribution function, expectation and variance of the number of hosts parasitized after a given time, as well as the inverse problem, estimating the sampling effort. We develop the relationship between the risk distribution on the set of hosts and the speed of parasitization and propose a more elegant proof of the weak stochastic dominance among speeds of parasitization, using the concept of Schur convexity and the 'Robin Hood transfer' numerical operation. Numerical examples are provided and a conjecture about strong dominance-an ordering characteristic of random variables-is proposed. The speed at which new items are discovered is a function of the entire shape of the sampling probability distribution. The sole comparison of values of variances is not sufficient to compare speeds associated with different distributions, as generally assumed in ecological studies.
© 2017 The Author(s).

Entities:  

Keywords:  coupon collector's problem; ecology; parasitoid; stochastic dominance; strong dominance

Mesh:

Year:  2017        PMID: 28179550      PMCID: PMC5332560          DOI: 10.1098/rsif.2016.0643

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  15 in total

1.  The molecular diversity of adaptive convergence.

Authors:  Olivier Tenaillon; Alejandra Rodríguez-Verdugo; Rebecca L Gaut; Pamela McDonald; Albert F Bennett; Anthony D Long; Brandon S Gaut
Journal:  Science       Date:  2012-01-27       Impact factor: 47.728

2.  Skewed attacks, stability, and host suppression.

Authors:  Abhyudai Singh; William W Murdoch; Roger M Nisbet
Journal:  Ecology       Date:  2009-06       Impact factor: 5.499

3.  The puzzle of partial resource use by a parasitoid wasp.

Authors:  Kathryn J Montovan; Christelle Couchoux; Laura E Jones; H Kern Reeve; Saskya van Nouhuys
Journal:  Am Nat       Date:  2015-03-06       Impact factor: 3.926

4.  Estimating vocal repertoire size is like collecting coupons: a theoretical framework with heterogeneity in signal abundance.

Authors:  Arik Kershenbaum; Todd M Freeberg; David E Gammon
Journal:  J Theor Biol       Date:  2015-03-16       Impact factor: 2.691

Review 5.  Diversity, population structure, and individual behaviour of parasitoids as seen using molecular markers.

Authors:  Saskya van Nouhuys
Journal:  Curr Opin Insect Sci       Date:  2016-02-22       Impact factor: 5.186

6.  Partition structures, Polya urns, the Ewens sampling formula, and the ages of alleles.

Authors:  P Donnelly
Journal:  Theor Popul Biol       Date:  1986-10       Impact factor: 1.570

7.  The sampling theory of selectively neutral alleles.

Authors:  W J Ewens
Journal:  Theor Popul Biol       Date:  1972-03       Impact factor: 1.570

8.  Egg distributions and the information a solitary parasitoid has and uses for its oviposition decisions.

Authors:  Lia Hemerik; Nelly van der Hoeven; Jacques J M van Alphen
Journal:  Acta Biotheor       Date:  2002       Impact factor: 1.774

9.  Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing.

Authors:  Kristof Vandewalle; Nele Festjens; Evelyn Plets; Marnik Vuylsteke; Yvan Saeys; Nico Callewaert
Journal:  Nat Commun       Date:  2015-05-11       Impact factor: 14.919

Review 10.  Bacteriophages as model organisms for virus emergence research.

Authors:  John J Dennehy
Journal:  Trends Microbiol       Date:  2009-09-16       Impact factor: 17.079

View more
  1 in total

1.  Stochasticity in host-parasitoid models informs mechanisms regulating population dynamics.

Authors:  Abhyudai Singh
Journal:  Sci Rep       Date:  2021-08-18       Impact factor: 4.379

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.