Literature DB >> 28178253

Core promoters across the genome.

Nevena Cvetesic1, Boris Lenhard1.   

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Year:  2017        PMID： 28178253     DOI： 10.1038/nbt.3788

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  9 in total

Review 1.  Promoter architectures and developmental gene regulation.

Authors:  Vanja Haberle; Boris Lenhard
Journal:  Semin Cell Dev Biol       Date:  2016-01-16       Impact factor: 7.727

2.  CAGE: cap analysis of gene expression.

Authors:  Rimantas Kodzius; Miki Kojima; Hiromi Nishiyori; Mari Nakamura; Shiro Fukuda; Michihira Tagami; Daisuke Sasaki; Kengo Imamura; Chikatoshi Kai; Matthias Harbers; Yoshihide Hayashizaki; Piero Carninci
Journal:  Nat Methods       Date:  2006-03       Impact factor: 28.547

3.  Genome-wide quantitative enhancer activity maps identified by STARR-seq.

Authors:  Cosmas D Arnold; Daniel Gerlach; Christoph Stelzer; Łukasz M Boryń; Martina Rath; Alexander Stark
Journal:  Science       Date:  2013-01-17       Impact factor: 47.728

4.  Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers.

Authors:  Leighton J Core; André L Martins; Charles G Danko; Colin T Waters; Adam Siepel; John T Lis
Journal:  Nat Genet       Date:  2014-11-10       Impact factor: 38.330

5.  Genome-wide mapping of autonomous promoter activity in human cells.

Authors:  Joris van Arensbergen; Vincent D FitzPatrick; Marcel de Haas; Ludo Pagie; Jasper Sluimer; Harmen J Bussemaker; Bas van Steensel
Journal:  Nat Biotechnol       Date:  2016-12-26       Impact factor: 54.908

6.  Genome-wide assessment of sequence-intrinsic enhancer responsiveness at single-base-pair resolution.

Authors:  Cosmas D Arnold; Muhammad A Zabidi; Michaela Pagani; Martina Rath; Katharina Schernhuber; Tomáš Kazmar; Alexander Stark
Journal:  Nat Biotechnol       Date:  2016-12-26       Impact factor: 54.908

7.  Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.

Authors:  Muhammad A Zabidi; Cosmas D Arnold; Katharina Schernhuber; Michaela Pagani; Martina Rath; Olga Frank; Alexander Stark
Journal:  Nature       Date:  2014-12-15       Impact factor: 49.962

8.  Two independent transcription initiation codes overlap on vertebrate core promoters.

Authors:  Vanja Haberle; Nan Li; Yavor Hadzhiev; Charles Plessy; Christopher Previti; Chirag Nepal; Jochen Gehrig; Xianjun Dong; Altuna Akalin; Ana Maria Suzuki; Wilfred F J van IJcken; Olivier Armant; Marco Ferg; Uwe Strähle; Piero Carninci; Ferenc Müller; Boris Lenhard
Journal:  Nature       Date:  2014-02-16       Impact factor: 49.962

9.  CapSeq and CIP-TAP identify Pol II start sites and reveal capped small RNAs as C. elegans piRNA precursors.

Authors:  Weifeng Gu; Heng-Chi Lee; Daniel Chaves; Elaine M Youngman; Gregory J Pazour; Darryl Conte; Craig C Mello
Journal:  Cell       Date:  2012-12-21       Impact factor: 41.582
  9 in total

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