Literature DB >> 16489339

CAGE: cap analysis of gene expression.

Rimantas Kodzius1, Miki Kojima, Hiromi Nishiyori, Mari Nakamura, Shiro Fukuda, Michihira Tagami, Daisuke Sasaki, Kengo Imamura, Chikatoshi Kai, Matthias Harbers, Yoshihide Hayashizaki, Piero Carninci.   

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Year:  2006        PMID： 16489339     DOI： 10.1038/nmeth0306-211

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  175 in total

1.  Annotation of the domestic dog genome sequence: finding the missing genes.

Authors:  Thomas Derrien; Amaury Vaysse; Catherine André; Christophe Hitte
Journal:  Mamm Genome       Date:  2011-11-11       Impact factor: 2.957

Review 2.  Plant transcriptomics and responses to environmental stress: an overview.

Authors:  Sameen Ruqia Imadi; Alvina Gul Kazi; Mohammad Abass Ahanger; Salih Gucel; Parvaiz Ahmad
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

Review 3.  The complexity of the mammalian transcriptome.

Authors:  Stefano Gustincich; Albin Sandelin; Charles Plessy; Shintaro Katayama; Roberto Simone; Dejan Lazarevic; Yoshihide Hayashizaki; Piero Carninci
Journal:  J Physiol       Date:  2006-07-20       Impact factor: 5.182

4.  Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines.

Authors:  Jaswinder Khattra; Allen D Delaney; Yongjun Zhao; Asim Siddiqui; Jennifer Asano; Helen McDonald; Pawan Pandoh; Noreen Dhalla; Anna-Liisa Prabhu; Kevin Ma; Stephanie Lee; Adrian Ally; Angela Tam; Danne Sa; Sean Rogers; David Charest; Jeff Stott; Scott Zuyderduyn; Richard Varhol; Connie Eaves; Steven Jones; Robert Holt; Martin Hirst; Pamela A Hoodless; Marco A Marra
Journal:  Genome Res       Date:  2006-11-29       Impact factor: 9.043

5.  Characterization of the intronic portion of cadherin superfamily members, common cancer orchestrators.

Authors:  Patrícia Oliveira; Remo Sanges; David Huntsman; Elia Stupka; Carla Oliveira
Journal:  Eur J Hum Genet       Date:  2012-02-08       Impact factor: 4.246

Review 6.  Genome-wide approaches for cancer gene discovery.

Authors:  Paul M Lizardi; Matteo Forloni; Narendra Wajapeyee
Journal:  Trends Biotechnol       Date:  2011-07-13       Impact factor: 19.536

7.  A code for transcription initiation in mammalian genomes.

Authors:  Martin C Frith; Eivind Valen; Anders Krogh; Yoshihide Hayashizaki; Piero Carninci; Albin Sandelin
Journal:  Genome Res       Date:  2007-11-21       Impact factor: 9.043

8.  Chromatin structure analyses identify miRNA promoters.

Authors:  Fatih Ozsolak; Laura L Poling; Zhengxin Wang; Hui Liu; X Shirley Liu; Robert G Roeder; Xinmin Zhang; Jun S Song; David E Fisher
Journal:  Genes Dev       Date:  2008-11-15       Impact factor: 11.361

9.  Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.

Authors:  Eivind Valen; Giovanni Pascarella; Alistair Chalk; Norihiro Maeda; Miki Kojima; Chika Kawazu; Mitsuyoshi Murata; Hiromi Nishiyori; Dejan Lazarevic; Dario Motti; Troels Torben Marstrand; Man-Hung Eric Tang; Xiaobei Zhao; Anders Krogh; Ole Winther; Takahiro Arakawa; Jun Kawai; Christine Wells; Carsten Daub; Matthias Harbers; Yoshihide Hayashizaki; Stefano Gustincich; Albin Sandelin; Piero Carninci
Journal:  Genome Res       Date:  2008-12-11       Impact factor: 9.043

10.  Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line.

Authors:  Qi Zhao; Otavia L Caballero; Samuel Levy; Brian J Stevenson; Christian Iseli; Sandro J de Souza; Pedro A Galante; Dana Busam; Margaret A Leversha; Kalyani Chadalavada; Yu-Hui Rogers; J Craig Venter; Andrew J G Simpson; Robert L Strausberg
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205
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