Literature DB >> 28154080

Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus.

Xindan Wang1, Hugo B Brandão2, Tung B K Le3, Michael T Laub3,4, David Z Rudner1.   

Abstract

Structural maintenance of chromosomes (SMC) complexes play critical roles in chromosome dynamics in virtually all organisms, but how they function remains poorly understood. In the bacterium Bacillus subtilis, SMC-condensin complexes are topologically loaded at centromeric sites adjacent to the replication origin. Here we provide evidence that these ring-shaped assemblies tether the left and right chromosome arms together while traveling from the origin to the terminus (>2 megabases) at rates >50 kilobases per minute. Condensin movement scales linearly with time, providing evidence for an active transport mechanism. These data support a model in which SMC complexes function by processively enlarging DNA loops. Loop formation followed by processive enlargement provides a mechanism by which condensin complexes compact and resolve sister chromatids in mitosis and by which cohesin generates topologically associating domains during interphase.
Copyright © 2017, American Association for the Advancement of Science.

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Year:  2017        PMID: 28154080      PMCID: PMC5484144          DOI: 10.1126/science.aai8982

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  39 in total

1.  Real-time detection of single-molecule DNA compaction by condensin I.

Authors:  Terence R Strick; Tatsuhiko Kawaguchi; Tatsuya Hirano
Journal:  Curr Biol       Date:  2004-05-25       Impact factor: 10.834

2.  Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.

Authors:  Pierre Nicolas; Ulrike Mäder; Etienne Dervyn; Tatiana Rochat; Aurélie Leduc; Nathalie Pigeonneau; Elena Bidnenko; Elodie Marchadier; Mark Hoebeke; Stéphane Aymerich; Dörte Becher; Paola Bisicchia; Eric Botella; Olivier Delumeau; Geoff Doherty; Emma L Denham; Mark J Fogg; Vincent Fromion; Anne Goelzer; Annette Hansen; Elisabeth Härtig; Colin R Harwood; Georg Homuth; Hanne Jarmer; Matthieu Jules; Edda Klipp; Ludovic Le Chat; François Lecointe; Peter Lewis; Wolfram Liebermeister; Anika March; Ruben A T Mars; Priyanka Nannapaneni; David Noone; Susanne Pohl; Bernd Rinn; Frank Rügheimer; Praveen K Sappa; Franck Samson; Marc Schaffer; Benno Schwikowski; Leif Steil; Jörg Stülke; Thomas Wiegert; Kevin M Devine; Anthony J Wilkinson; Jan Maarten van Dijl; Michael Hecker; Uwe Völker; Philippe Bessières; Philippe Noirot
Journal:  Science       Date:  2012-03-02       Impact factor: 47.728

3.  The SMC condensin complex is required for origin segregation in Bacillus subtilis.

Authors:  Xindan Wang; Olive W Tang; Eammon P Riley; David Z Rudner
Journal:  Curr Biol       Date:  2014-01-16       Impact factor: 10.834

4.  spo0J is required for normal chromosome segregation as well as the initiation of sporulation in Bacillus subtilis.

Authors:  K Ireton; N W Gunther; A D Grossman
Journal:  J Bacteriol       Date:  1994-09       Impact factor: 3.490

5.  Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B. subtilis.

Authors:  Stephan Gruber; Jeff Errington
Journal:  Cell       Date:  2009-05-15       Impact factor: 41.582

6.  Formation of Chromosomal Domains by Loop Extrusion.

Authors:  Geoffrey Fudenberg; Maxim Imakaev; Carolyn Lu; Anton Goloborodko; Nezar Abdennur; Leonid A Mirny
Journal:  Cell Rep       Date:  2016-05-19       Impact factor: 9.423

7.  SMC condensin entraps chromosomal DNA by an ATP hydrolysis dependent loading mechanism in Bacillus subtilis.

Authors:  Larissa Wilhelm; Frank Bürmann; Anita Minnen; Ho-Chul Shin; Christopher P Toseland; Byung-Ha Oh; Stephan Gruber
Journal:  Elife       Date:  2015-05-07       Impact factor: 8.140

8.  Molecular basis for SMC rod formation and its dissolution upon DNA binding.

Authors:  Young-Min Soh; Frank Bürmann; Ho-Chul Shin; Takashi Oda; Kyeong Sik Jin; Christopher P Toseland; Cheolhee Kim; Hansol Lee; Soo Jin Kim; Min-Seok Kong; Marie-Laure Durand-Diebold; Yeon-Gil Kim; Ho Min Kim; Nam Ki Lee; Mamoru Sato; Byung-Ha Oh; Stephan Gruber
Journal:  Mol Cell       Date:  2014-12-31       Impact factor: 17.970

9.  Control of Smc Coiled Coil Architecture by the ATPase Heads Facilitates Targeting to Chromosomal ParB/parS and Release onto Flanking DNA.

Authors:  Anita Minnen; Frank Bürmann; Larissa Wilhelm; Anna Anchimiuk; Marie-Laure Diebold-Durand; Stephan Gruber
Journal:  Cell Rep       Date:  2016-02-18       Impact factor: 9.423

10.  MatP regulates the coordinated action of topoisomerase IV and MukBEF in chromosome segregation.

Authors:  Sophie Nolivos; Amy L Upton; Anjana Badrinarayanan; Julius Müller; Katarzyna Zawadzka; Jakub Wiktor; Amber Gill; Lidia Arciszewska; Emilien Nicolas; David Sherratt
Journal:  Nat Commun       Date:  2016-01-28       Impact factor: 14.919

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  97 in total

Review 1.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

Review 2.  Two major mechanisms of chromosome organization.

Authors:  Leonid A Mirny; Maxim Imakaev; Nezar Abdennur
Journal:  Curr Opin Cell Biol       Date:  2019-06-20       Impact factor: 8.382

3.  DNA-segment-capture model for loop extrusion by structural maintenance of chromosome (SMC) protein complexes.

Authors:  John F Marko; Paolo De Los Rios; Alessandro Barducci; Stephan Gruber
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

Review 4.  Condensins and cohesins - one of these things is not like the other!

Authors:  Robert V Skibbens
Journal:  J Cell Sci       Date:  2019-02-07       Impact factor: 5.285

5.  XerD unloads bacterial SMC complexes at the replication terminus.

Authors:  Xheni Karaboja; Zhongqing Ren; Hugo B Brandão; Payel Paul; David Z Rudner; Xindan Wang
Journal:  Mol Cell       Date:  2021-01-19       Impact factor: 17.970

Review 6.  Genome folding through loop extrusion by SMC complexes.

Authors:  Iain F Davidson; Jan-Michael Peters
Journal:  Nat Rev Mol Cell Biol       Date:  2021-03-25       Impact factor: 94.444

7.  Multi-scale architecture of archaeal chromosomes.

Authors:  Naomichi Takemata; Stephen D Bell
Journal:  Mol Cell       Date:  2020-12-30       Impact factor: 17.970

Review 8.  Potential roles of condensin in genome organization and beyond in fission yeast.

Authors:  Kyoung-Dong Kim
Journal:  J Microbiol       Date:  2021-04-20       Impact factor: 3.422

9.  DNA's secret weapon against knots and tangles.

Authors:  Elie Dolgin
Journal:  Nature       Date:  2017-04-19       Impact factor: 49.962

10.  Bacterial chromosome organization by collective dynamics of SMC condensins.

Authors:  Christiaan A Miermans; Chase P Broedersz
Journal:  J R Soc Interface       Date:  2018-10-17       Impact factor: 4.118

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