Literature DB >> 24440393

The SMC condensin complex is required for origin segregation in Bacillus subtilis.

Xindan Wang1, Olive W Tang1, Eammon P Riley1, David Z Rudner2.   

Abstract

SMC condensin complexes play a central role in organizing and compacting chromosomes in all domains of life [1, 2]. In the bacterium Bacillus subtilis, cells lacking SMC are viable only during slow growth and display decondensed chromosomes, suggesting that SMC complexes function throughout the genome [3, 4]. Here, we show that rapid inactivation of SMC or its partner protein ScpB during fast growth leads to a failure to resolve newly replicated origins and a complete block to chromosome segregation. Importantly, the loss of origin segregation is not due to an inability to unlink precatenated sister chromosomes by Topoisomerase IV. In support of the idea that ParB-mediated recruitment of SMC complexes to the origin is important for their segregation, cells with reduced levels of SMC that lack ParB are severely impaired in origin resolution. Finally, we demonstrate that origin segregation is a task shared by the condensin complex and the parABS partitioning system. We propose that origin-localized SMC constrains adjacent DNA segments along their lengths, drawing replicated origins in on themselves and away from each other. This SMC-mediated lengthwise condensation, bolstered by the parABS system, drives origin segregation.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24440393      PMCID: PMC3947903          DOI: 10.1016/j.cub.2013.11.050

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  27 in total

1.  13S condensin actively reconfigures DNA by introducing global positive writhe: implications for chromosome condensation.

Authors:  K Kimura; V V Rybenkov; N J Crisona; T Hirano; N R Cozzarelli
Journal:  Cell       Date:  1999-07-23       Impact factor: 41.582

2.  Cell cycle-dependent localization of two novel prokaryotic chromosome segregation and condensation proteins in Bacillus subtilis that interact with SMC protein.

Authors:  Judita Mascarenhas; Jörg Soppa; Alexander V Strunnikov; Peter L Graumann
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

Review 3.  The structure and function of SMC and kleisin complexes.

Authors:  Kim Nasmyth; Christian H Haering
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

4.  Opening closed arms: long-distance activation of SMC ATPase by hinge-DNA interactions.

Authors:  Michiko Hirano; Tatsuya Hirano
Journal:  Mol Cell       Date:  2006-01-20       Impact factor: 17.970

5.  Characterization of a prokaryotic SMC protein involved in chromosome partitioning.

Authors:  R A Britton; D C Lin; A D Grossman
Journal:  Genes Dev       Date:  1998-05-01       Impact factor: 11.361

6.  A Bacillus subtilis gene-encoding protein homologous to eukaryotic SMC motor protein is necessary for chromosome partition.

Authors:  S Moriya; E Tsujikawa; A K Hassan; K Asai; T Kodama; N Ogasawara
Journal:  Mol Microbiol       Date:  1998-07       Impact factor: 3.501

7.  Spatial and temporal organization of replicating Escherichia coli chromosomes.

Authors:  Ivy F Lau; Sergio R Filipe; Britta Søballe; Ole-Andreas Økstad; Francois-Xavier Barre; David J Sherratt
Journal:  Mol Microbiol       Date:  2003-08       Impact factor: 3.501

8.  Discovery of two novel families of proteins that are proposed to interact with prokaryotic SMC proteins, and characterization of the Bacillus subtilis family members ScpA and ScpB.

Authors:  Jörg Soppa; Kazuo Kobayashi; Marie-Françoise Noirot-Gros; Dieter Oesterhelt; S Dusko Ehrlich; Etienne Dervyn; Naotake Ogasawara; Shigeki Moriya
Journal:  Mol Microbiol       Date:  2002-07       Impact factor: 3.501

9.  Control of DNA replication initiation by recruitment of an essential initiation protein to the membrane of Bacillus subtilis.

Authors:  Megan E Rokop; Jennifer M Auchtung; Alan D Grossman
Journal:  Mol Microbiol       Date:  2004-06       Impact factor: 3.501

10.  Genetic transposition and insertional mutagenesis in Bacillus subtilis with Streptococcus faecalis transposon Tn917.

Authors:  P J Youngman; J B Perkins; R Losick
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

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  54 in total

1.  SMC condensin: promoting cohesion of replicon arms.

Authors:  Frank Bürmann; Stephan Gruber
Journal:  Nat Struct Mol Biol       Date:  2015-09       Impact factor: 15.369

2.  Methyltransferase DnmA is responsible for genome-wide N6-methyladenosine modifications at non-palindromic recognition sites in Bacillus subtilis.

Authors:  Taylor M Nye; Lieke A van Gijtenbeek; Amanda G Stevens; Jeremy W Schroeder; Justin R Randall; Lindsay A Matthews; Lyle A Simmons
Journal:  Nucleic Acids Res       Date:  2020-06-04       Impact factor: 16.971

3.  Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus.

Authors:  Xindan Wang; Hugo B Brandão; Tung B K Le; Michael T Laub; David Z Rudner
Journal:  Science       Date:  2017-02-03       Impact factor: 47.728

4.  Insights into ParB spreading from the complex structure of Spo0J and parS.

Authors:  Bo-Wei Chen; Ming-Hsing Lin; Chen-Hsi Chu; Chia-En Hsu; Yuh-Ju Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

5.  XerD unloads bacterial SMC complexes at the replication terminus.

Authors:  Xheni Karaboja; Zhongqing Ren; Hugo B Brandão; Payel Paul; David Z Rudner; Xindan Wang
Journal:  Mol Cell       Date:  2021-01-19       Impact factor: 17.970

Review 6.  Genome folding through loop extrusion by SMC complexes.

Authors:  Iain F Davidson; Jan-Michael Peters
Journal:  Nat Rev Mol Cell Biol       Date:  2021-03-25       Impact factor: 94.444

7.  Bacterial chromosome organization by collective dynamics of SMC condensins.

Authors:  Christiaan A Miermans; Chase P Broedersz
Journal:  J R Soc Interface       Date:  2018-10-17       Impact factor: 4.118

Review 8.  Centromeric heterochromatin: the primordial segregation machine.

Authors:  Kerry S Bloom
Journal:  Annu Rev Genet       Date:  2014-09-18       Impact factor: 16.830

9.  Bacillus subtilis chromosome organization oscillates between two distinct patterns.

Authors:  Xindan Wang; Paula Montero Llopis; David Z Rudner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-28       Impact factor: 11.205

10.  The Conserved DNA Binding Protein WhiA Influences Chromosome Segregation in Bacillus subtilis.

Authors:  Laura C Bohorquez; Katarina Surdova; Martijs J Jonker; Leendert W Hamoen
Journal:  J Bacteriol       Date:  2018-03-26       Impact factor: 3.490

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