Literature DB >> 28145117

Spectroscopic Evidences for Strong Hydrogen Bonds with Selenomethionine in Proteins.

V Rao Mundlapati1,2, Dipak Kumar Sahoo1,2, Sanat Ghosh3, Umesh Kumar Purame2,4, Shubhant Pandey2,4, Rudresh Acharya2,4, Nitish Pal1,2, Prince Tiwari1,2, Himansu S Biswal1,2.   

Abstract

Careful protein structure analysis unravels many unknown and unappreciated noncovalent interactions that control protein structure; one such unrecognized interaction in protein is selenium centered hydrogen bonds (SeCHBs). We report, for the first time, SeCHBs involving the amide proton and selenium of selenomethionine (Mse), i.e., amide-N-H···Se H-bonds discerned in proteins. Using mass selective and conformer specific high resolution vibrational spectroscopy, gold standard quantum chemical calculations at CCSD(T), and in-depth protein structure analysis, we establish that amide-N-H···Se and amide-N-H···Te H-bonds are as strong as conventional amide-NH···O and amide-NH···O═C H-bonds despite smaller electronegativity of selenium and tellurium than oxygen. It is in fact, electronegativity, atomic charge, and polarizability of the H-bond acceptor atoms are at play in deciding the strength of H-bonds. The amide-N-H···Se and amide-N-H···Te H-bonds presented here are not only new additions to the ever expanding world of noncovalent interactions, but also are of central importance to design new force-fields for better biomolecular structure simulations.

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Year:  2017        PMID: 28145117     DOI: 10.1021/acs.jpclett.6b02931

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  4 in total

1.  77Se NMR Probes the Protein Environment of Selenomethionine.

Authors:  Qingqing Chen; Shiping Xu; Xingyu Lu; Michael V Boeri; Yuliya Pepelyayeva; Elizabeth L Diaz; Sunil-Datta Soni; Marc Allaire; Martin B Forstner; Brian J Bahnson; Sharon Rozovsky
Journal:  J Phys Chem B       Date:  2020-01-07       Impact factor: 2.991

2.  Selenium in Proteins: Conformational Changes Induced by Se Substitution on Methionine, as Studied in Isolated Model Peptides by Optical Spectroscopy and Quantum Chemistry.

Authors:  Gildas Goldsztejn; Venkateswara Rao Mundlapati; Valérie Brenner; Eric Gloaguen; Michel Mons
Journal:  Molecules       Date:  2022-05-15       Impact factor: 4.927

3.  Comparing C2=O and C2=S Barbiturates: Different Hydrogen-Bonding Patterns of Thiobarbiturates in Solution and the Solid State.

Authors:  Chenming Li; Philipp Hilgeroth; Nazmul Hasan; Dieter Ströhl; Jörg Kressler; Wolfgang H Binder
Journal:  Int J Mol Sci       Date:  2021-11-24       Impact factor: 5.923

4.  Importance of water and intramolecular interaction governs substantial blue shift of Csp2 -H stretching frequency in complexes between chalcogenoaldehydes and water.

Authors:  Nguyen Thi Thanh Cuc; Nguyen Truong An; Vu Thi Ngan; Asit K Chandra; Nguyen Tien Trung
Journal:  RSC Adv       Date:  2022-01-12       Impact factor: 3.361

  4 in total

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