Literature DB >> 28144752

Novel FAM134B mutations and their clinicopathological significance in colorectal cancer.

Farhadul Islam1, Vinod Gopalan1, Riajul Wahab1, Katherine Ting-Wei Lee1, Md Hakimul Haque1, Afraa Mamoori1, Cu-Tai Lu2, Robert A Smith1,3, Alfred K-Y Lam4.   

Abstract

FAM134B is a putative tumour suppressor gene and no mutations in FAM134B have been reported in colorectal cancer (CRC) to date. This study aims to identify FAM134B mutation sites and the clinicopathological significance of the gene in patients with CRC. Eighty-eight colorectal cancers were studied for FAM134B mutations by Sanger sequencing. The mutations in these cancers were then tested for correlations with the clinical and pathological parameters of the studied cancers. In addition, mRNA and protein expression of FAM134B in colorectal cancers was examined by polymerase chain reaction, Western blots, and immunofluorescence analysis. FAM134B mutation was noted in 46.5% (41/88) of patients with CRC. Thirty-one novel potentially pathogenic mutations were noted in coding and intronic regions of FAM134B in CRC, the majority of which were single-nucleotide substitutions. Of the 31 mutations, eight novel frameshift mutations showed potential to cause non-sense-mediated mRNA decay (NMD) in computational analysis. In addition, FAM134B mutations were associated with various clinical and pathological variables, including sex of the patients, presence of metachronous cancer, size, T staging, presence of distant metastases, and positivity of microsatellite instability (MSI) in the cancer (p < 0.05). FAM134B mRNA and protein expression was decreased in FAM134B mutated cancers. To conclude, FAM134B mutation is common in colorectal cancer. The association of the mutation of this gene with adverse clinical and pathological parameters is congruent with the tumour suppressive properties of the gene.

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Year:  2017        PMID: 28144752     DOI: 10.1007/s00439-017-1760-4

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  34 in total

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9.  p16 expression in colorectal adenocarcinoma: marker of aggressiveness and morphological types.

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  7 in total

1.  Overexpression of family with sequence similarity 134, member B (FAM134B) in colon cancers and its tumor suppressive properties in vitro.

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2.  Integrated diagnostic network construction reveals a 4-gene panel and 5 cancer hallmarks driving breast cancer heterogeneity.

Authors:  Xiaofeng Dai; Tongyan Hua; Tingting Hong
Journal:  Sci Rep       Date:  2017-07-28       Impact factor: 4.379

3.  Transcriptome profile analysis of leg muscle tissues between slow- and fast-growing chickens.

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5.  Identification of Novel Mutations and Expressions of EPAS1 in Phaeochromocytomas and Paragangliomas.

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Review 6.  Critical roles of FAM134B in ER-phagy and diseases.

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7.  Identification of novel mutations and functional impacts of EPAS1 in colorectal cancer.

Authors:  Farhadul Islam; Vinod Gopalan; Cu Tai Lu; Suja Pillai; Alfred K Lam
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  7 in total

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