Literature DB >> 28135235

An allosteric PRC2 inhibitor targeting the H3K27me3 binding pocket of EED.

Wei Qi1, Kehao Zhao1, Justin Gu1, Ying Huang1, Youzhen Wang1, Hailong Zhang1, Man Zhang1, Jeff Zhang1, Zhengtian Yu1, Ling Li1, Lin Teng1, Shannon Chuai1, Chao Zhang1, Mengxi Zhao1, HoMan Chan1, Zijun Chen1, Douglas Fang1, Qi Fei1, Leying Feng1, Lijian Feng1, Yuan Gao1, Hui Ge1, Xinjian Ge1, Guobin Li1, Andreas Lingel2, Ying Lin1, Yueqin Liu1, Fangjun Luo1, Minlong Shi1, Long Wang1, Zhaofu Wang1, Yanyan Yu1, Jue Zeng1, Chenhui Zeng1, Lijun Zhang1, Qiong Zhang1, Shaolian Zhou1, Counde Oyang1, Peter Atadja1, En Li1.   

Abstract

Polycomb repressive complex 2 (PRC2) consists of three core subunits, EZH2, EED and SUZ12, and plays pivotal roles in transcriptional regulation. The catalytic subunit EZH2 methylates histone H3 lysine 27 (H3K27), and its activity is further enhanced by the binding of EED to trimethylated H3K27 (H3K27me3). Small-molecule inhibitors that compete with the cofactor S-adenosylmethionine (SAM) have been reported. Here we report the discovery of EED226, a potent and selective PRC2 inhibitor that directly binds to the H3K27me3 binding pocket of EED. EED226 induces a conformational change upon binding EED, leading to loss of PRC2 activity. EED226 shows similar activity to SAM-competitive inhibitors in blocking H3K27 methylation of PRC2 target genes and inducing regression of human lymphoma xenograft tumors. Interestingly, EED226 also effectively inhibits PRC2 containing a mutant EZH2 protein resistant to SAM-competitive inhibitors. Together, we show that EED226 inhibits PRC2 activity via an allosteric mechanism and offers an opportunity for treatment of PRC2-dependent cancers.

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Year:  2017        PMID: 28135235     DOI: 10.1038/nchembio.2304

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  53 in total

Review 1.  The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3.

Authors:  Ru Cao; Yi Zhang
Journal:  Curr Opin Genet Dev       Date:  2004-04       Impact factor: 5.578

2.  EZH2 Mediates epigenetic silencing of neuroblastoma suppressor genes CASZ1, CLU, RUNX3, and NGFR.

Authors:  Chunxi Wang; Zhihui Liu; Chan-Wook Woo; Zhijie Li; Lifeng Wang; Jun S Wei; Victor E Marquez; Susan E Bates; Qihuang Jin; Javed Khan; Kai Ge; Carol J Thiele
Journal:  Cancer Res       Date:  2011-11-08       Impact factor: 12.701

3.  Structural basis of EZH2 recognition by EED.

Authors:  Zhifu Han; Xinmiao Xing; Min Hu; Yin Zhang; Peiyuan Liu; Jijie Chai
Journal:  Structure       Date:  2007-10       Impact factor: 5.006

4.  A liquid chromatography/mass spectrometry-based generic detection method for biochemical assay and hit discovery of histone methyltransferases.

Authors:  Shu Li; X Justin Gu; Qin Hao; Hong Fan; Ling Li; Shaolian Zhou; Kehao Zhao; Ho Man Chan; Y Karen Wang
Journal:  Anal Biochem       Date:  2013-09-07       Impact factor: 3.365

5.  Structural basis of histone H3K27 trimethylation by an active polycomb repressive complex 2.

Authors:  Lianying Jiao; Xin Liu
Journal:  Science       Date:  2015-10-15       Impact factor: 47.728

6.  Analysis of the binding of mixed lineage leukemia 1 (MLL1) and histone 3 peptides to WD repeat domain 5 (WDR5) for the design of inhibitors of the MLL1-WDR5 interaction.

Authors:  Hacer Karatas; Elizabeth C Townsend; Denzil Bernard; Yali Dou; Shaomeng Wang
Journal:  J Med Chem       Date:  2010-07-22       Impact factor: 7.446

7.  H3K36 methylation antagonizes PRC2-mediated H3K27 methylation.

Authors:  Wen Yuan; Mo Xu; Chang Huang; Nan Liu; She Chen; Bing Zhu
Journal:  J Biol Chem       Date:  2011-01-14       Impact factor: 5.157

8.  PRC2 loss amplifies Ras-driven transcription and confers sensitivity to BRD4-based therapies.

Authors:  Thomas De Raedt; Eline Beert; Eric Pasmant; Armelle Luscan; Hilde Brems; Nicolas Ortonne; Kristian Helin; Jason L Hornick; Victor Mautner; Hildegard Kehrer-Sawatzki; Wade Clapp; James Bradner; Michel Vidaud; Meena Upadhyaya; Eric Legius; Karen Cichowski
Journal:  Nature       Date:  2014-08-13       Impact factor: 49.962

9.  An orally bioavailable chemical probe of the Lysine Methyltransferases EZH2 and EZH1.

Authors:  Kyle D Konze; Anqi Ma; Fengling Li; Dalia Barsyte-Lovejoy; Trevor Parton; Christopher J Macnevin; Feng Liu; Cen Gao; Xi-Ping Huang; Ekaterina Kuznetsova; Marie Rougie; Alice Jiang; Samantha G Pattenden; Jacqueline L Norris; Lindsey I James; Bryan L Roth; Peter J Brown; Stephen V Frye; Cheryl H Arrowsmith; Klaus M Hahn; Gang Greg Wang; Masoud Vedadi; Jian Jin
Journal:  ACS Chem Biol       Date:  2013-04-24       Impact factor: 5.100

10.  Identification of EZH2 and EZH1 small molecule inhibitors with selective impact on diffuse large B cell lymphoma cell growth.

Authors:  Shivani Garapaty-Rao; Christopher Nasveschuk; Alexandre Gagnon; Eric Y Chan; Peter Sandy; Jennifer Busby; Srividya Balasubramanian; Robert Campbell; Feng Zhao; Louise Bergeron; James E Audia; Brian K Albrecht; Jean-Christophe Harmange; Richard Cummings; Patrick Trojer
Journal:  Chem Biol       Date:  2013-10-31
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  103 in total

1.  Discovery and Characterization of a Cellular Potent Positive Allosteric Modulator of the Polycomb Repressive Complex 1 Chromodomain, CBX7.

Authors:  Kelsey N Lamb; Daniel Bsteh; Sarah N Dishman; Hagar F Moussa; Huitao Fan; Jacob I Stuckey; Jacqueline L Norris; Stephanie H Cholensky; Dongxu Li; Jingkui Wang; Cari Sagum; Benjamin Z Stanton; Mark T Bedford; Kenneth H Pearce; Terry P Kenakin; Dmitri B Kireev; Gang Greg Wang; Lindsey I James; Oliver Bell; Stephen V Frye
Journal:  Cell Chem Biol       Date:  2019-08-15       Impact factor: 8.116

2.  C10ORF12 modulates PRC2 histone methyltransferase activity and H3K27me3 levels.

Authors:  Yi Shi; Hong-Lei Ma; You-Wen Zhuang; Xiao-Xi Wang; Yi Jiang; H Eric Xu
Journal:  Acta Pharmacol Sin       Date:  2019-06-11       Impact factor: 6.150

Review 3.  Polycomb repressive 2 complex-Molecular mechanisms of function.

Authors:  Valentina L Kouznetsova; Alex Tchekanov; Xiaoming Li; Xiaowen Yan; Igor F Tsigelny
Journal:  Protein Sci       Date:  2019-06-10       Impact factor: 6.725

Review 4.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

Review 5.  Recent progress in developing selective inhibitors of protein methyltransferases.

Authors:  H Ümit Kaniskan; Jian Jin
Journal:  Curr Opin Chem Biol       Date:  2017-06-26       Impact factor: 8.822

6.  Chromatin biology: Breaking into the PRC2 cage.

Authors:  Daniel Holoch; Raphaël Margueron
Journal:  Nat Chem Biol       Date:  2017-01-30       Impact factor: 15.040

Review 7.  Epigenetic regulatory mutations and epigenetic therapy for multiple myeloma.

Authors:  Daphné Dupéré-Richer; Jonathan D Licht
Journal:  Curr Opin Hematol       Date:  2017-07       Impact factor: 3.284

Review 8.  Chromatin-Remodeled State in Lymphoma.

Authors:  Yuxuan Liu; Yulissa Gonzalez; Jennifer E Amengual
Journal:  Curr Hematol Malig Rep       Date:  2019-10       Impact factor: 3.952

Review 9.  Histone Methyltransferase EZH2: A Therapeutic Target for Ovarian Cancer.

Authors:  Bayley A Jones; Sooryanarayana Varambally; Rebecca C Arend
Journal:  Mol Cancer Ther       Date:  2018-03       Impact factor: 6.261

Review 10.  Domain cross-talk in regulation of histone modifications: Molecular mechanisms and targeting opportunities.

Authors:  James E Longbotham; Meng Yao Zhang; Danica Galonić Fujimori
Journal:  Curr Opin Chem Biol       Date:  2020-08-03       Impact factor: 8.822

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