Literature DB >> 28131390

Calpain-14 and its association with eosinophilic esophagitis.

Vladislav A Litosh1, Mark Rochman1, Jeffrey K Rymer2, Aleksey Porollo3, Leah C Kottyan3, Marc E Rothenberg4.   

Abstract

Calpains are a family of intracellular, calcium-dependent cysteine proteases involved in a variety of regulatory processes, including cytoskeletal dynamics, cell-cycle progression, signal transduction, gene expression, and apoptosis. These enzymes have been implicated in a number of disease processes, notably for this review involving eosinophilic tissue inflammation, such as eosinophilic esophagitis (EoE), a chronic inflammatory disorder triggered by allergic hypersensitivity to food and associated with genetic variants in calpain 14 (CAPN14). Herein we review the genetic, structural, and biochemical properties of CAPN14 and its gene product CAPN14, and its emerging role in patients with EoE. The CAPN14 gene is localized at chromosome 2p23.1-p21 and is most homologous to CAPN13 (36% sequence identity), which is located 365 kb downstream of CAPN14. Structurally, CAPN14 has classical calpain motifs, including a cysteine protease core. In comparison with other human calpains, CAPN14 has a unique expression pattern, with the highest levels in the upper gastrointestinal tract, particularly in the squamous epithelium of the esophagus. The CAPN14 gene is positioned in an epigenetic hotspot regulated by IL-13, a TH2 cytokine with increased levels in patients with EoE that has been shown to be a mediator of the disease. CAPN14 induces disruptive effects on the esophageal epithelium by impairing epithelial barrier function in association with loss of desmoglein-1 expression and has a regulatory role in repairing epithelial changes induced by IL-13. Thus CAPN14 is a unique protease with distinct tissue-specific expression and function in patients with EoE and is a potential therapeutic target for EoE and related eosinophilic and allergic diseases.
Copyright © 2017 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Calpains; IL-13; calpain-14; calpainopathy; desmoglein-1; enzymes; eosinophilic esophagitis; eosinophils; epithelial barrier; food allergy; genetics; limb-girdle muscular dystrophy; myositis

Mesh:

Substances:

Year:  2017        PMID: 28131390      PMCID: PMC5461191          DOI: 10.1016/j.jaci.2016.09.027

Source DB:  PubMed          Journal:  J Allergy Clin Immunol        ISSN: 0091-6749            Impact factor:   10.793


  61 in total

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Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Identification and characterization of two novel calpain large subunit genes.

Authors:  T N Dear; T Boehm
Journal:  Gene       Date:  2001-08-22       Impact factor: 3.688

3.  POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins.

Authors:  Aleksey A Porollo; Rafal Adamczak; Jaroslaw Meller
Journal:  Bioinformatics       Date:  2004-04-08       Impact factor: 6.937

4.  Crystal structure of calpain-3 penta-EF-hand (PEF) domain - a homodimerized PEF family member with calcium bound at the fifth EF-hand.

Authors:  Sarathy K Partha; Ravikiran Ravulapalli; John S Allingham; Robert L Campbell; Peter L Davies
Journal:  FEBS J       Date:  2014-06-09       Impact factor: 5.542

5.  Eosinophilic esophagitis-linked calpain 14 is an IL-13-induced protease that mediates esophageal epithelial barrier impairment.

Authors:  Benjamin P Davis; Emily M Stucke; M Eyad Khorki; Vladislav A Litosh; Jeffrey K Rymer; Mark Rochman; Jared Travers; Leah C Kottyan; Marc E Rothenberg
Journal:  JCI Insight       Date:  2016-04

6.  Calpain 3 is a modulator of the dysferlin protein complex in skeletal muscle.

Authors:  Yanchao Huang; Antoine de Morrée; Alexandra van Remoortere; Kate Bushby; Rune R Frants; Johan T den Dunnen; Silvère M van der Maarel
Journal:  Hum Mol Genet       Date:  2008-03-11       Impact factor: 6.150

7.  Mitochondrial abnormalities, energy deficit and oxidative stress are features of calpain 3 deficiency in skeletal muscle.

Authors:  Irina Kramerova; Elena Kudryashova; Benjamin Wu; Sean Germain; Krista Vandenborne; Nadine Romain; Ronald G Haller; M Anthony Verity; Melissa J Spencer
Journal:  Hum Mol Genet       Date:  2009-05-29       Impact factor: 6.150

8.  Allosteric inhibitors of calpains: Reevaluating inhibition by PD150606 and LSEAL.

Authors:  Kristin E Low; Sarathy Karunan Partha; Peter L Davies; Robert L Campbell
Journal:  Biochim Biophys Acta       Date:  2014-09-04

9.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

10.  Characterization of the definitive classical calpain family of vertebrates using phylogenetic, evolutionary and expression analyses.

Authors:  Daniel J Macqueen; Alexander H Wilcox
Journal:  Open Biol       Date:  2014-04-09       Impact factor: 6.411

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  34 in total

Review 1.  Role of genetics, environment, and their interactions in the pathogenesis of eosinophilic esophagitis.

Authors:  John Lyles; Marc Rothenberg
Journal:  Curr Opin Immunol       Date:  2019-05-25       Impact factor: 7.486

Review 2.  Pathophysiology of Eosinophilic Esophagitis.

Authors:  Kelly M O'Shea; Seema S Aceves; Evan S Dellon; Sandeep K Gupta; Jonathan M Spergel; Glenn T Furuta; Marc E Rothenberg
Journal:  Gastroenterology       Date:  2017-07-27       Impact factor: 22.682

3.  DNA methylation in nasal epithelium, atopy, and atopic asthma in children: a genome-wide study.

Authors:  Erick Forno; Ting Wang; Cancan Qi; Qi Yan; Cheng-Jian Xu; Nadia Boutaoui; Yueh-Ying Han; Daniel E Weeks; Yale Jiang; Franziska Rosser; Judith M Vonk; Sharon Brouwer; Edna Acosta-Perez; Angel Colón-Semidey; María Alvarez; Glorisa Canino; Gerard H Koppelman; Wei Chen; Juan C Celedón
Journal:  Lancet Respir Med       Date:  2018-12-21       Impact factor: 30.700

4.  Eosinophilic esophagitis (EoE) genetic susceptibility is mediated by synergistic interactions between EoE-specific and general atopic disease loci.

Authors:  Lisa J Martin; Hua He; Margaret H Collins; J Pablo Abonia; Joceyln M Biagini Myers; Michael Eby; Hanna Johansson; Leah C Kottyan; Gurjit K Khurana Hershey; Marc E Rothenberg
Journal:  J Allergy Clin Immunol       Date:  2017-11-10       Impact factor: 10.793

Review 5.  Calpain-2 as a therapeutic target for acute neuronal injury.

Authors:  Yubin Wang; Xiaoning Bi; Michel Baudry
Journal:  Expert Opin Ther Targets       Date:  2017-11-28       Impact factor: 6.902

6.  Elevated expression of activated TH2 cells and milk-specific TH2 cells in milk-induced eosinophilic esophagitis.

Authors:  Antonella Cianferoni; Melanie A Ruffner; Ryan Guzek; Shaobo Guan; Terri Brown-Whitehorn; Amanda Muir; Jonathan M Spergel
Journal:  Ann Allergy Asthma Immunol       Date:  2017-12-28       Impact factor: 6.347

Review 7.  The genetic etiology of eosinophilic esophagitis.

Authors:  Leah C Kottyan; Sreeja Parameswaran; Matthew T Weirauch; Marc E Rothenberg; Lisa J Martin
Journal:  J Allergy Clin Immunol       Date:  2020-01       Impact factor: 10.793

Review 8.  Epithelial origin of eosinophilic esophagitis.

Authors:  Mark Rochman; Nurit P Azouz; Marc E Rothenberg
Journal:  J Allergy Clin Immunol       Date:  2018-07       Impact factor: 10.793

9.  Whole-exome sequencing uncovers oxidoreductases DHTKD1 and OGDHL as linkers between mitochondrial dysfunction and eosinophilic esophagitis.

Authors:  Joseph D Sherrill; Kiran Kc; Xinjian Wang; Ting Wen; Adam Chamberlin; Emily M Stucke; Margaret H Collins; J Pablo Abonia; Yanyan Peng; Qiang Wu; Philip E Putnam; Phillip J Dexheimer; Bruce J Aronow; Leah C Kottyan; Kenneth M Kaufman; John B Harley; Taosheng Huang; Marc E Rothenberg
Journal:  JCI Insight       Date:  2018-04-19

Review 10.  Genetics of eosinophilic esophagitis.

Authors:  L C Kottyan; M E Rothenberg
Journal:  Mucosal Immunol       Date:  2017-02-22       Impact factor: 7.313

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