Literature DB >> 28125361

RNA-mediated communication between helminths and their hosts: The missing links.

Julie Claycomb1, Cei Abreu-Goodger2, Amy H Buck3.   

Abstract

Small RNAs have been discovered in a wide variety of extracellular environments and are now thought to participate in communication between cells and even between different organisms and species. Helminths are parasitic worms that generally reside in extracellular niches in their hosts and can establish chronic infection through the release of immunomodulatory factors. Recent work has demonstrated that Extracellular RNA (exRNA) may be another class of immunomodulator secreted by helminths. Here we will detail what is known about small RNA pathways in helminth pathogens (focusing on nematodes) and mammalian hosts. We will then explore the computational challenges with identifying RNA-RNA interactions between 2 different species and the paradigm of RNA-RNA co-evolution that accompanies this. Finally we explore the lingering questions that require further investigation to understand the properties of exRNA that would enable it to function as an immunomodulator.

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Year:  2017        PMID: 28125361      PMCID: PMC5411118          DOI: 10.1080/15476286.2016.1274852

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  48 in total

Review 1.  RNA interference in Caenorhabditis elegans: uptake, mechanism, and regulation.

Authors:  Jimmy J Zhuang; Craig P Hunter
Journal:  Parasitology       Date:  2011-11-11       Impact factor: 3.234

Review 2.  microRNA Biogenesis and Function : An overview.

Authors:  René F Ketting
Journal:  Adv Exp Med Biol       Date:  2011       Impact factor: 2.622

Review 3.  Exosome-transported microRNAs of helminth origin: new tools for allergic and autoimmune diseases therapy?

Authors:  M Siles-Lucas; R Morchon; F Simon; R Manzano-Roman
Journal:  Parasite Immunol       Date:  2015-04       Impact factor: 2.280

Review 4.  Extracellular miRNA: A Collision of Two Paradigms.

Authors:  Andrey Turchinovich; Alexander G Tonevitsky; Barbara Burwinkel
Journal:  Trends Biochem Sci       Date:  2016-09-03       Impact factor: 13.807

5.  tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma.

Authors:  Roy L Maute; Christof Schneider; Pavel Sumazin; Antony Holmes; Andrea Califano; Katia Basso; Riccardo Dalla-Favera
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-07       Impact factor: 11.205

6.  Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.

Authors:  Hadi Valadi; Karin Ekström; Apostolos Bossios; Margareta Sjöstrand; James J Lee; Jan O Lötvall
Journal:  Nat Cell Biol       Date:  2007-05-07       Impact factor: 28.824

Review 7.  Small RNAs break out: the molecular cell biology of mobile small RNAs.

Authors:  Peter Sarkies; Eric A Miska
Journal:  Nat Rev Mol Cell Biol       Date:  2014-08       Impact factor: 94.444

8.  Extracellular vesicle-mediated transfer of functional RNA in the tumor microenvironment.

Authors:  Kirsten Ridder; Alexandra Sevko; Janina Heide; Maria Dams; Anne-Kathleen Rupp; Jadranka Macas; Julia Starmann; Marc Tjwa; Karl H Plate; Holger Sültmann; Peter Altevogt; Viktor Umansky; Stefan Momma
Journal:  Oncoimmunology       Date:  2015-03-19       Impact factor: 8.110

9.  Gene expression changes induced by Trypanosoma cruzi shed microvesicles in mammalian host cells: relevance of tRNA-derived halves.

Authors:  Maria R Garcia-Silva; Florencia Cabrera-Cabrera; Roberta Ferreira Cura das Neves; Thaís Souto-Padrón; Wanderley de Souza; Alfonso Cayota
Journal:  Biomed Res Int       Date:  2014-04-09       Impact factor: 3.411

Review 10.  The Ribonuclease A Superfamily in Humans: Canonical RNases as the Buttress of Innate Immunity.

Authors:  Patrick Koczera; Lukas Martin; Gernot Marx; Tobias Schuerholz
Journal:  Int J Mol Sci       Date:  2016-08-05       Impact factor: 5.923

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  9 in total

1.  RNA as a means of inter-species communication and manipulation: Progresses and shortfalls.

Authors:  Sassan Asgari
Journal:  RNA Biol       Date:  2017-04-03       Impact factor: 4.652

Review 2.  Co-evolution in the Jungle: From Leafcutter Ant Colonies to Chromosomal Ends.

Authors:  Ľubomír Tomáška; Jozef Nosek
Journal:  J Mol Evol       Date:  2020-03-10       Impact factor: 2.395

Review 3.  Extracellular tRNAs and tRNA-derived fragments.

Authors:  Juan Pablo Tosar; Alfonso Cayota
Journal:  RNA Biol       Date:  2020-02-19       Impact factor: 4.652

4.  Nematode microRNAs can Individually Regulate Interferon Regulatory Factor 4 and mTOR in Differentiating T Helper 2 Lymphocytes and Modulate Cytokine Production in Macrophages.

Authors:  Julien Soichot; Nathalie Guttmann; Hubert Rehrauer; Nicole Joller; Lucienne Tritten
Journal:  Front Mol Biosci       Date:  2022-06-28

5.  Small RNAs in parasitic nematodes - forms and functions.

Authors:  Collette Britton; Roz Laing; Eileen Devaney
Journal:  Parasitology       Date:  2019-12-17       Impact factor: 3.234

6.  Extracellular Vesicle-Contained microRNA of C. elegans as a Tool to Decipher the Molecular Basis of Nematode Parasitism.

Authors:  Thomas B Duguet; Julien Soichot; Rostyslav Kuzyakiv; Lars Malmström; Lucienne Tritten
Journal:  Front Cell Infect Microbiol       Date:  2020-05-25       Impact factor: 5.293

Review 7.  Parasite-derived microRNAs as a diagnostic biomarker: potential roles, characteristics, and limitations.

Authors:  Vahid Raissi; Mohammad Zibaei; Omid Raiesi; Zahra Samani; Mohammad Yarahmadi; Soudabeh Etemadi; Afrida Istiqomah; Zahra Alizadeh; Shahrzad Shadabi; Nasrin Sohrabi; Asmaa Ibrahim
Journal:  J Parasit Dis       Date:  2021-04-22

8.  Extracellular vesicles from Heligmosomoides bakeri and Trichuris muris contain distinct microRNA families and small RNAs that could underpin different functions in the host.

Authors:  Ruby White; Sujai Kumar; Franklin Wang-Ngai Chow; Elaine Robertson; Kelly S Hayes; Richard K Grencis; María A Duque-Correa; Amy H Buck
Journal:  Int J Parasitol       Date:  2020-07-11       Impact factor: 3.981

9.  Genome-scale MicroRNA target prediction through clustering with Dirichlet process mixture model.

Authors:  Zeynep Hakguder; Jiang Shu; Chunxiao Liao; Kaiyue Pan; Juan Cui
Journal:  BMC Genomics       Date:  2018-09-24       Impact factor: 3.969

  9 in total

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