Literature DB >> 22075748

RNA interference in Caenorhabditis elegans: uptake, mechanism, and regulation.

Jimmy J Zhuang1, Craig P Hunter.   

Abstract

RNA interference (RNAi) is a powerful research tool that has enabled molecular insights into gene activity, pathway analysis, partial loss-of-function phenotypes, and large-scale genomic discovery of gene function. While RNAi works extremely well in the non-parasitic nematode C. elegans, it is also especially useful in organisms that lack facile genetic analysis. Extensive genetic analysis of the mechanisms, delivery and regulation of RNAi in C. elegans has provided mechanistic and phenomenological insights into why RNAi is so effective in this species. These insights are useful for the testing and development of RNAi in other nematodes, including parasitic nematodes where more effective RNAi would be extremely useful. Here, we review the current advances in C. elegans for RNA delivery methods, regulation of cell autonomous and systemic RNAi phenomena, and implications of enhanced RNAi mutants. These discussions, with a focus on mechanism and cross-species application, provide new perspectives for optimizing RNAi in other species.

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Year:  2011        PMID: 22075748     DOI: 10.1017/S0031182011001788

Source DB:  PubMed          Journal:  Parasitology        ISSN: 0031-1820            Impact factor:   3.234


  19 in total

Review 1.  RNA-mediated communication between helminths and their hosts: The missing links.

Authors:  Julie Claycomb; Cei Abreu-Goodger; Amy H Buck
Journal:  RNA Biol       Date:  2017-01-26       Impact factor: 4.652

Review 2.  RNAi screening comes of age: improved techniques and complementary approaches.

Authors:  Stephanie E Mohr; Jennifer A Smith; Caroline E Shamu; Ralph A Neumüller; Norbert Perrimon
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09       Impact factor: 94.444

Review 3.  Conversations between kingdoms: small RNAs.

Authors:  Arne Weiberg; Marschal Bellinger; Hailing Jin
Journal:  Curr Opin Biotechnol       Date:  2015-01-23       Impact factor: 9.740

Review 4.  Recent advances in functional genomics for parasitic nematodes of mammals.

Authors:  Michelle L Castelletto; Spencer S Gang; Elissa A Hallem
Journal:  J Exp Biol       Date:  2020-02-07       Impact factor: 3.312

5.  Assays for direct and indirect effects of C. elegans endo-siRNAs.

Authors:  Philip K Shiu; Jimmy J Zhuang; Craig P Hunter
Journal:  Methods Mol Biol       Date:  2014

6.  Solexa sequencing based transcriptome analysis of Helicoverpa armigera larvae.

Authors:  Jigang Li; Xiumin Li; Yongli Chen; Zhongxiang Yang; Sandui Guo
Journal:  Mol Biol Rep       Date:  2012-10-12       Impact factor: 2.316

7.  IP3 signalling regulates exogenous RNAi in Caenorhabditis elegans.

Authors:  Anikó I Nagy; Rafael P Vázquez-Manrique; Marie Lopez; Christo P Christov; María Dolores Sequedo; Mareike Herzog; Anna E Herlihy; Maxime Bodak; Roxani Gatsi; Howard A Baylis
Journal:  EMBO Rep       Date:  2015-01-21       Impact factor: 8.807

8.  ABCE1 is a highly conserved RNA silencing suppressor.

Authors:  Kairi Kärblane; Jelena Gerassimenko; Lenne Nigul; Alla Piirsoo; Agata Smialowska; Kadri Vinkel; Per Kylsten; Karl Ekwall; Peter Swoboda; Erkki Truve; Cecilia Sarmiento
Journal:  PLoS One       Date:  2015-02-06       Impact factor: 3.240

Review 9.  Application of small RNA technology for improved control of parasitic helminths.

Authors:  Collette Britton; Alan D Winter; Neil D Marks; Henry Gu; Tom N McNeilly; Victoria Gillan; Eileen Devaney
Journal:  Vet Parasitol       Date:  2015-06-09       Impact factor: 2.738

10.  Using Multiple Phenotype Assays and Epistasis Testing to Enhance the Reliability of RNAi Screening and Identify Regulators of Muscle Protein Degradation.

Authors:  Susann Lehmann; Freya Shephard; Lewis A Jacobson; Nathaniel J Szewczyk
Journal:  Genes (Basel)       Date:  2012-11-02       Impact factor: 4.096

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