Literature DB >> 28113876

Automatic Nuclei Detection Based on Generalized Laplacian of Gaussian Filters.

Richard Berendt, Naresh Jha, Mrinal Mandal.   

Abstract

Efficient and accurate detection of cell nuclei is an important step toward automatic analysis in histopathology. In this work, we present an automatic technique based on generalized Laplacian of Gaussian (gLoG) filter for nuclei detection in digitized histological images. The proposed technique first generates a bank of gLoG kernels with different scales and orientations and then performs convolution between directional gLoG kernels and the candidate image to obtain a set of response maps. The local maxima of response maps are detected and clustered into different groups by mean-shift algorithm based on their geometrical closeness. The point which has the maximum response in each group is finally selected as the nucleus seed. Experimental results on two datasets show that the proposed technique provides a superior performance in nuclei detection compared to existing techniques.

Mesh:

Year:  2016        PMID: 28113876     DOI: 10.1109/JBHI.2016.2544245

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  6 in total

1.  An oral cavity squamous cell carcinoma quantitative histomorphometric-based image classifier of nuclear morphology can risk stratify patients for disease-specific survival.

Authors:  Cheng Lu; James S Lewis; William D Dupont; W Dale Plummer; Andrew Janowczyk; Anant Madabhushi
Journal:  Mod Pathol       Date:  2017-08-04       Impact factor: 7.842

2.  Computerized spermatogenesis staging (CSS) of mouse testis sections via quantitative histomorphological analysis.

Authors:  Jun Xu; Haoda Lu; Haixin Li; Chaoyang Yan; Xiangxue Wang; Min Zang; Dirk G de Rooij; Anant Madabhushi; Eugene Yujun Xu
Journal:  Med Image Anal       Date:  2020-10-10       Impact factor: 8.545

3.  Relationship between the Ki67 index and its area based approximation in breast cancer.

Authors:  Muhammad Khalid Khan Niazi; Caglar Senaras; Michael Pennell; Vidya Arole; Gary Tozbikian; Metin N Gurcan
Journal:  BMC Cancer       Date:  2018-09-03       Impact factor: 4.430

4.  Deep Learning Nuclei Detection in Digitized Histology Images by Superpixels.

Authors:  Sudhir Sornapudi; Ronald Joe Stanley; William V Stoecker; Haidar Almubarak; Rodney Long; Sameer Antani; George Thoma; Rosemary Zuna; Shelliane R Frazier
Journal:  J Pathol Inform       Date:  2018-03-05

5.  Nuclear IHC enumeration: A digital phantom to evaluate the performance of automated algorithms in digital pathology.

Authors:  Muhammad Khalid Khan Niazi; Fazly Salleh Abas; Caglar Senaras; Michael Pennell; Berkman Sahiner; Weijie Chen; John Opfer; Robert Hasserjian; Abner Louissaint; Arwa Shana'ah; Gerard Lozanski; Metin N Gurcan
Journal:  PLoS One       Date:  2018-05-10       Impact factor: 3.240

6.  Blind blur assessment of MRI images using parallel multiscale difference of Gaussian filters.

Authors:  Michael E Osadebey; Marius Pedersen; Douglas L Arnold; Katrina E Wendel-Mitoraj
Journal:  Biomed Eng Online       Date:  2018-06-13       Impact factor: 2.819

  6 in total

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