| Literature DB >> 28106743 |
Anca Stana1, Dan C Vodnar2, Radu Tamaian3,4, Adrian Pîrnău5, Laurian Vlase6, Ioana Ionuț7, Ovidiu Oniga8, Brînduşa Tiperciuc9.
Abstract
Twenty-three thiazolin-4-ones were synthesized starting fromEntities:
Keywords: ADME-Tox predictors; antifungal activity; lanosterol 14α-demethylase; lipophilicity; molecular docking; thiazolin-4-one
Mesh:
Substances:
Year: 2017 PMID: 28106743 PMCID: PMC5297809 DOI: 10.3390/ijms18010177
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Scheme 1Synthesis of 2-substituted thiazolin-4-ones.
Scheme 2Synthesis of 5-arylidene-thiazolin-4-ones 3a–h, 6a–e and 9a–e.
The antifungal activity of the synthesized thiazolin-4-one derivatives (inhibition zone diameters (mm)).
| 2, 5, 8, 10, 11 | Fluconazole | 3a–h, 6a–e, 9a–e | |
|---|---|---|---|
| Compound | R | Ar | |
| CH2=CH–CH2–NH– | - | 20 ± 0.2 | |
| C6H5–NH– | - | ||
| α-C10H7–NH– | - | ||
| CH3–NH– | - | ||
| C6H5– | - | 18 ± 1 | |
| CH2=CH–CH2–NH– | 20 ± 0.5 | ||
| C6H5–NH– | 20 ± 0.5 | ||
| α-C10H7–NH– | 18 ± 1 | ||
| CH2=CH–CH2–NH– | 20 ± 0.5 | ||
| C6H5–NH– | 20 ± 1 | ||
| α-C10H7–NH– | 18 ± 0.2 | ||
| CH2=CH–CH2–NH– | 18 ± 1 | ||
| C6H5–NH– | 20 ± 1 | ||
| α-C10H7–NH– | 20 ± 0.5 | ||
| CH2=CH–CH2–NH– | 20 ± 0.2 | ||
| C6H5–NH– | 20 ± 1 | ||
| α-C10H7–NH– | 20 ± 1 | ||
| CH2=CH–CH2–NH– | 20 ± 0.5 | ||
| C6H5–NH– | 16 ± 1 | ||
| α-C10H7–NH– | |||
| CH2=CH–CH2–NH– | |||
| CH2=CH–CH2–NH– | |||
| CH2=CH–CH2–NH– | 20 ± 0.5 | ||
The value obtained for each compound represents the mean of three independent measurements ± SD. The values obtained for the most active compounds are marked in bold.
Minimum Inhibitory Concentration (MIC) (µg/mL) and Minimum Fungicidal Concentration (MFC) (µg/mL) of the thiazolin-4-one derivatives.
| Samples | ||||||||
|---|---|---|---|---|---|---|---|---|
| MIC | MFC | MIC | MFC | MIC | MFC | MIC | MFC | |
| 31.25 | ||||||||
| 31.25 | ||||||||
| 31.25 | 31.25 | 15.62 | 31.25 | |||||
| 31.25 | 62.5 | 31.25 | 62.5 | |||||
| 31.25 | 62.5 | |||||||
| 1.95 | ||||||||
| 0.48 | ||||||||
| 0.24 | ||||||||
| 15.62 | ||||||||
| 15.62 | ||||||||
| 0.97 | ||||||||
| 3.9 | ||||||||
| +++ | - | +++ | - | +++ | - | +++ | - | |
| No growth | - | No growth | - | No growth | - | No growth | - | |
- indicates the compound has no inhibitory activity; +++ indicates growth in all concentrations. The values obtained for the most active compounds are marked in bold.
The eigenvalues of the five components (i-propanol concentration).
| Component | Eigenvalue | Difference | Variability (%) | Cumulative (%) |
|---|---|---|---|---|
| 4.830 | 4.671 | 96.609 | 96.609 | |
| 0.159 | 0.153 | 3.175 | 99.784 | |
| 0.006 | 0.002 | 0.123 | 99.907 | |
| 0.004 | 0.003 | 0.071 | 99.978 | |
| 0.001 | - | 0.022 | 100.000 |
Eigenvectors associated with the first two principal components.
| Component | Eigenvector | |
|---|---|---|
| 0.437 | 0.693 | |
| 0.450 | 0.361 | |
| 0.452 | −0.240 | |
| 0.451 | −0.310 | |
| 0.446 | −0.485 | |
Regression data, scores of the two first principal components and cLogP values for the studied compounds.
| Compound | b | cLogP | ||||
|---|---|---|---|---|---|---|
| 0.0414 | −1.1059 | 0.9014 | 4.335 | 0.879 | 0.779 | |
| 2.0801 | −3.6152 | 0.9413 | −0.090 | −0.268 | 3.725 | |
| 2.2398 | −3.6102 | 0.9716 | −1.263 | −0.062 | 4.438 | |
| 1.7553 | −3.314 | 0.9537 | 1.049 | −0.259 | 2.755 | |
| 2.2119 | −3.7366 | 0.9427 | −0.549 | −0.241 | 3.454 | |
| 2.2869 | −3.9184 | 0.9455 | −0.349 | −0.354 | 2.965 | |
| 0.6734 | −1.9546 | 0.9598 | 3.365 | 0.453 | 2.1942 | |
| 1.1465 | −2.6897 | 0.9407 | 2.905 | 0.056 | 2.345 | |
| 0.9459 | −2.2931 | 0.9239 | 2.796 | 0.238 | 0.851 | |
| 2.1738 | −3.9258 | 0.9316 | 0.485 | −0.534 | 4.86 | |
| 2.4679 | −4.0118 | 0.9544 | −1.253 | −0.186 | 5.573 | |
| 1.7388 | −3.3696 | 0.9487 | 1.394 | −0.304 | 3.89 | |
| 2.1996 | −3.8092 | 0.9346 | −0.168 | −0.359 | 4.589 | |
| 2.22 | −3.9066 | 0.9518 | 0.079 | −0.443 | 4.1 | |
| 1.6225 | −3.0931 | 0.9344 | 1.125 | −0.163 | 2.025 | |
| 2.5309 | −4.1292 | 0.9555 | −1.227 | −0.239 | 6.034 | |
| 2.9283 | −4.3675 | 0.9661 | −2.876 | 0.232 | 6.747 | |
| 2.7789 | −4.1555 | 0.9654 | −2.722 | 0.228 | 5.264 | |
| 3.287 | −4.6935 | 0.8744 | −3.746 | 0.618 | 5.763 | |
| 2.3983 | −3.319 | 0.9422 | −3.292 | 0.708 | 5.274 |
Figure 1The relationship between experimental lipophilicity indices (RM0, P1) and computed cLogP values.
Figure 2Congeneric lipophilicity chart (2D plot) obtained by plotting the scores corresponding to P1 and P2.
The results of VS carried out for lead-like and drug-like descriptors.
| ID | MW (Da) | LogP | HBA | HBD | tPSA (Å2) | RtB | RiB | Rs | MxS | Cs | HA | H/C | Crg | TCrg | SC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.21 | 0.79 | 3 | 1 | 66.76 | 3 | 7 | 1 | 5 | 6 | 4 | 0.67 | 1 | −1 | 0 | |
| 278.76 | 3.54 | 3 | 1 | 66.76 | 4 | 14 | 2 | 6 | 13 | 5 | 0.38 | 0 | 0 | 0 | |
| 313.20 | 3 | 1 | 66.76 | 4 | 14 | 2 | 6 | 13 | 6 | 0.46 | 0 | 0 | 0 | ||
| 289.31 | 2.74 | 6 | 1 | 112.58 | 5 | 16 | 2 | 6 | 13 | 7 | 0.54 | 0 | 0 | 0 | |
| 327.42 | 3.64 | 4 | 1 | 107.89 | 5 | 19 | 3 | 6 | 16 | 6 | 0.38 | 0 | 0 | 0 | |
| 346.79 | 3.18 | 5 | 1 | 96.97 | 4 | 20 | 2 | 10 | 16 | 7 | 0.44 | 0 | 0 | 0 | |
| 323.21 | 3.61 | 3 | 1 | 66.76 | 4 | 14 | 2 | 6 | 13 | 5 | 0.38 | 0 | 0 | 0 | |
| 290.34 | 2.53 | 5 | 2 | 96.22 | 5 | 14 | 2 | 6 | 14 | 6 | 0.43 | 0 | 0 | 0 | |
| 260.31 | 2.56 | 4 | 2 | 86.99 | 4 | 14 | 2 | 6 | 13 | 5 | 0.38 | 0 | 0 | 0 | |
| 192.24 | 1.70 | 3 | 1 | 73.08 | 2 | 12 | 2 | 6 | 9 | 4 | 0.44 | 1 | -1 | 0 | |
| 314.79 | 3 | 1 | 66.76 | 3 | 19 | 3 | 6 | 16 | 5 | 0.31 | 0 | 0 | 0 | ||
| 349.23 | 3 | 1 | 66.76 | 3 | 19 | 3 | 6 | 16 | 6 | 0.38 | 0 | 0 | 0 | ||
| 325.34 | 3.66 | 6 | 1 | 112.58 | 4 | 21 | 3 | 6 | 16 | 7 | 0.44 | 0 | 0 | 0 | |
| 363.46 | 4 | 1 | 107.89 | 4 | 24 | 4 | 6 | 19 | 6 | 0.32 | 0 | 0 | 0 | ||
| 382.82 | 5 | 1 | 96.97 | 3 | 25 | 3 | 10 | 19 | 7 | 0.37 | 0 | 0 | 0 | ||
| 242.30 | 2.95 | 3 | 1 | 73.08 | 2 | 17 | 2 | 10 | 13 | 4 | 0.31 | 1 | −1 | 0 | |
| 364.85 | 3 | 1 | 66.76 | 3 | 24 | 3 | 10 | 20 | 5 | 0.25 | 0 | 0 | 0 | ||
| 399.29 | 3 | 1 | 66.76 | 3 | 24 | 3 | 10 | 20 | 6 | 0.30 | 0 | 0 | 0 | ||
| 375.40 | 6 | 1 | 112.58 | 4 | 26 | 3 | 10 | 20 | 7 | 0.35 | 0 | 0 | 0 | ||
| 413.51 | 4 | 1 | 107.89 | 4 | 29 | 4 | 10 | 23 | 6 | 0.26 | 0 | 0 | 0 | ||
| 432.88 | 5 | 1 | 96.97 | 3 | 30 | 3 | 10 | 23 | 7 | 0.30 | 0 | 0 | 0 | ||
| 0.15 | 3 | 1 | 66.76 | 1 | 6 | 1 | 5 | 4 | 4 | 1.00 | 1 | −1 | 0 | ||
| 177.22 | 1.98 | 2 | 0 | 54.73 | 1 | 12 | 2 | 6 | 9 | 3 | 0.33 | 0 | 0 | 0 | |
| 306.27 | 0.52 | 7 | 1 | 81.65 | 5 | 16 | 3 | 6 | 13 | 9 | 0.69 | 0 | 0 | 1 | |
| 3.26 | 8 | 0 | 69.06 | 7 | 30 | 5 | 6 | 26 | 10 | 0.38 | 0 | 0 | 2 | ||
| 100–600 | −3–6 | ≤12 | ≤5 | ≤180 | ≤11 | ≤30 | ≤6 | ≤18 | 3–35 | 1–15 | 0.1–1.1 | ≤3 | −2–2 | - | |
| 150–400 | −3–4 | ≤7 | ≤4 | ≤160 | ≤9 | ≤30 | ≤4 | ≤18 | 3–35 | 1–15 | 0.1–1.1 | ≤3 | −2–2 | ≤2 | |
| 135–582 | −0.2–6.1 | ≤5 | ≤3 | 3–118 | - | - | - | - | - | - | - | - | - | - |
DLS: Threshold values of the Drug-Like Soft filter; LLS: Threshold values of the Lead-Like Soft filter; CNS: Threshold values of the CNS filter; Underlined values: Overpass the thresholds for lead-likeness filters; * bold, italic values: Overpass the thresholds for drug-likeness filters; Red values: Overpass the thresholds for CNS activity filters (penetration of BBB).
Binding affinity of the tested compounds (best poses) towards lanosterol-14α-demethylase.
| ID | BA (kcal/mol) | H-Bonds: Best Pose Interaction(s) with Lanosterol-14α-demethylase | |
|---|---|---|---|
| AA Residue(s) of Target | Interacting Atom(s) of the Ligand (#atom) | ||
| −5.4 | Asn440 | Oxygen (#6) | |
| Asn440 | Nitrogen (#2) | ||
| N/A | N/A(N/A) | ||
| Asn440 | Nitrogen (#2) | ||
| N/A | N/A(N/A) | ||
| Met508 | Nitrogen (#2) | ||
| Asn440 | Nitrogen (#2) | ||
| Asn440 | Nitrogen (#2) | ||
| Asn440 | Nitrogen (#2) | ||
| −7.4 | Tyr460 Ser436 | Hydrogen (#16) Oxygen (#6) | |
| Ile304 | Hydrogen (#22) | ||
| N/A | N/A(N/A) | ||
| N/A | N/A(N/A) | ||
| N/A | N/A(N/A) | ||
| N/A | N/A(N/A) | ||
| Asn440 | Oxygen (#6) | ||
| N/A | N/A(N/A) | ||
| His468 | Nitrogen (#2) | ||
| N/A | N/A(N/A) | ||
| N/A | N/A(N/A) | ||
| N/A | N/A(N/A) | ||
| −4.6 | Asn440 | Oxygen (#6) | |
| −6.9 | N/A | N/A(N/A) | |
| −7.6 | Thr311 | Nitrogen (#8) | |
| −10.0 | N/A | N/A(N/A) | |
N/A: Not available/assigned; #atom: Atoms numbering; Bold values: The best binding affinities (similar to or higher than those of the reference compounds).
Figure 3General view of docking poses of the screened compounds in the active site of lanosterol-14α-demethylase (target is depicted as thin sticks with secondary structure drawn as cartoon backbone, meanwhile ligands are figured as sticks): there can be described three binding patterns—Group A (left): 2, 3a, 3c, 3f–h, 5, 8, 10 and 11; Group B (right): 3b, 3d–e, 6d, 9a–9c and Ket; and Group C (center): 6a–c, 6e and Flu.