| Literature DB >> 28103790 |
Niren Ray Maharaj1,2, Prithiksha Ramkaran2, Siddharthiya Pillay2, Anil Amichund Chuturgoon3.
Abstract
BACKGROUND: South African (SA) Black women have a high prevalence of preeclampsia and HIV, both conditions associated with increased inflammation. miR-146a is an inflammatory-associated miR and a common single nucleotide polymorphism (rs2910164) has been associated with several disease conditions. To date, this SNP has not been investigated in SA Black women. We therefore aimed to investigate the miR-146a G > C SNP in SA Blacks with preeclampsia, and further examine possible association among preeclamptic (PE) women with HIV infection on HAART.Entities:
Keywords: Black SA women; HAART; HIV; Preeclampsia; miR-146a; rs2910164
Mesh:
Substances:
Year: 2017 PMID: 28103790 PMCID: PMC5248445 DOI: 10.1186/s12863-016-0469-z
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Fig. 1Diagrammatic representation of PCR-RFLP product sizes and corresponding genotypes. Lane 1 represents the PCR product
Clinical characteristics of participants
| Variable | PE Total ( | Normo Total | PE HIV- | PE HIV+ | Normo HIV– | Normo HIV+ |
|
|---|---|---|---|---|---|---|---|
| Mean age (mean ± SEM) | 26.6 ± 0.668 | 26.2 ± 0.673 | 24.8 ± 0.723 | 28.7 ± 1.108 | 24.6 ± 0.904 | 28.0 ± 0.947 | 0.708a
|
| Age range (years) | 16–42 | 16–46 | 16–40 | 16–42 | 16–42 | 17–46 | |
| Parity n (%) | |||||||
| 0 | 44 (45) | 22 (23) | 26 (49) | 18 (41) | 17 (34) | 5 (11) | 0.006b |
| 1–5 | 53 (55) | 70 (74) | 27 (50) | 26 (59) | 31 (62) | 39 (87) | 0.400c |
| > 5 | 1 (1.1) | 3 (3.2) | 0 (0.0) | 1 (2.2) | 2 (4.0) | 1 (2.2) | |
| Mean CD4 (x106/l) (n) | 447 ± 28.2 (44) | 427 ± 31.1 (47) | 670 ± 154 (2) | 437 ± 28.0 (42) | 399 ± 66.9 (7) | 432 ± 34.9 (40) | 0.6346a
|
| BMI (n) | 31.5 ± 0.847 (73) | 30.0 ± 0.889 (71) | 30.4 ± 1.30 (35) | 32.5 ± 1.10 (38) | 29.8 ± 1.22 (35) | 30.2 ± 1.30 (36) | 0.2126a
|
| MOD n (%) | <0.001b | ||||||
| ELCS | 18 (19) | 52 (55) | 9 (17) | 9 (20) | 25 (50) | 27 (60) | <0.001c |
| EMCS | 55 (56) | 24 (25) | 32 (60) | 23 (52) | 13 (26) | 11 (24) | |
| NVD | 24 (25) | 15 (16) | 12 (23) | 12 (27) | 9 (18) | 6 (13) | |
| TOTAL | 97 (100) | 91 (96) | 53 (100) | 44 (100) | 47 (94) | 44 (98) | |
| Blood Pressure (n) | |||||||
| - Systolic | 158 ± 1.75 (86) | 119 ± 1.32 (62) | 157 ± 17.2 (50) | 159 ± 2.17 | 119 ± 8.81 (29) | 119 ± 2.03 (33) | <.0.0001a
|
| - Diastolic | 103 ± 1.24 (93) | 74.7 ± 1.11 (62) | 102 ± 13.5 (50) | 104 ± 1.51 (43) | 73.9 ± 8.76 (29) | 75.3 ± 1.53 (33) | <.0.0001a
|
| Severe PE (%) | 18 (34) | 21 (48) | 0.121b | ||||
| EOPE (%) | 14 (26) | 18 (40) | 0.143b | ||||
| Cytokines | |||||||
| IL-2 (n) | 265 ± 3.57 (17) | 270 ± 0.949 (59) | 273 ± 4.76 (7) | 260 ± 4.59 (10) | 274 ± 1.24 (29) | 267 ± 1.21 (30) | 0.1827a
|
| IL-4 (n) | 251 ± 5.40 (18) | 244 ± 1.90 (59) | 258 ± 26.7 (8) | 245 ± 5.97 (10) | 248 ± 16.4 (29) | 241 ± 2.14 (30) | 0.2537a
|
| IL-6 (n) | 150 ± 8.28 (18) | 152 ± 4.29 (59) | 174 ± 36.5 (7) | 136 ± 7.90 (11) | 154 ± 28.1 (29) | 150 ± 6.83 (30) | 0.8938a
|
| IL-10 (n) | 138 ± 46.0 (16) | 81.7 ± 10.2 (54) | 237 ± 251 (7) | 61.4 ± 10.5 (9) | 95.9 ± 68.0 (29) | 66.4 ± 15.8 (26) | 0.249a
|
| IL-17a (n) | 1520 ± 311 (16) | 800 ± 31.5 (58) | 785 ± 118 (8) | 2250 ± 509 (8) | 773 ± 36.2 (29) | 827 ± 62.9 (29) | 0.036a
|
| TNF-α (n) | 186 ± 12.4 (19) | 175 ± 4.01 (60) | 203 ± 72.7 (8) | 173 ± 10.3 (11) | 186 ± 15.6 (29) | 164 ± 6.78 (31) | 0.416a
|
| IFN-γ (n) | 214 ± 11.1 (18) | 281 ± 64.7 (60) | 221 ± 70.5 (8) | 209 ± 4.82 (10) | 221 ± 15.4 (29) | 336 ± 125 (31) | 0.317a
|
Means represented as mean ± SEM (n)
Abbreviations: GA gestational age, BMI Body Mass Index, MOD mode of delivery, ELCS elective caesarean section, EMCS emergency caesarean section, NVD normal vaginal delivery, SEM standard error of mean, PE preeclampsia, NORMO normotensive, n total number, p is significant at <0.05
aComparison between NORMO and PE
Comparison amongst all four sub-groups (or between PE HIV- vs PE HIV+ for Severe PE and EOPE)
Comparison between PE HIV+ and NORMO HIV+
dAd-hoc test between Normo HIV – and Normo HIV +
eAd-hoc test between Normo HIV – and PE HIV -
fAd-hoc test between Normo HIV – and PE HIV +
gAd-hoc test between Normo HIV + and PE HIV -
hAd-hoc test between Normo HIV + and PE HIV +
iAd-hoc test between PE HIV – and PE HIV +
miR-146a genotype and allele frequency distribution in Normotensive and PE women
| Normotensive | Pre-eclamptic |
| |
|---|---|---|---|
| Genotype n (%) | |||
| GG | 31 (38.8) | 23 (38.3) | 0.430 |
| GC | 38 (47.5) | 24 (40.0) | |
| CC | 11 (13.8) | 13 (21.7) | |
| Allele n (%) | |||
| G | 100 (62.5) | 70 (58.3) | 0.707 (1.119; 0.6843–1.828) |
| C | 60 (37.5) | 50 (41.7) | |
| HWE | 0.627 | 0.390 | |
Abbreviations: HWE Hardy Weinberg Equilibrium, CI confidence interval, G guanine, C cytosine
Genotype and allele frequencies between groups
| NORMO HIV- | NORMO HIV+ | PE HIV- | PE HIV+ | |
|---|---|---|---|---|
| Genotype n (%) | ||||
| GG | 17 (40.5) | 14 (36.8) | 13 (41.9) | 10 (34.5) |
| GC | 20 (47.6) | 18 (47.4) | 12 (38.7) | 12 (41.4) |
| CC | 5 (11.9) | 6 (15.8) | 6 (19.4) | 7 (24.1) |
| Allele n (%) | ||||
| G | 54 (64.3) | 46 (60.5) | 38 (61.3) | 32 (55.2) |
| C | 30 (35.7) | 30 (39.5) | 24 (38.7) | 26 (44.8) |
| HWE | 0.971 | 0.999 | 0.591 | |
| Group comparison: | Genotypes | Alleles (G/C) | ||
|
|
| |||
| Norm HIV- vs. Norm HIV+ | 0.2420 | 0.6284 | ||
| (1.174; 0.6183–2.229) | ||||
| Norm HIV- vs. PE HIV- | 0.6098 | 0.7316 | ||
| (1.137; 0.5767–2.241) | ||||
| Norm HIV+ vs. PE HIV+ | 0.4661 | 0.5973 | ||
| (1.101; 0.8105–1.495) | ||||
| PE HIV—vs. PE HIV + | 0.8179 | 0.5793 | ||
| (1.286; 0.6215–2.663) | ||||
| Comparison between all four groups | 0.6734 | 0.7516 | ||
Clinical parameters analysed per genotype for pre-eclampsia and normotensive groups
| GC/CC vs. GGa | |||
|---|---|---|---|
| PE Total | PE - | PE + | |
| Age | 0.869 | 0.320 | 0.950 |
| 26.5 ± 1.11 (37) vs 26.8 ± 1.14 (36) | 24.3 ± 1.28 (18) vs 26.0 ± 1.08 (26) | 28.6 ± 1.68 (19) vs 28.8 ± 3.04 (10) | |
| BMI | 0.675 | 0.225 | 0.390 |
| (31.7 ± 1.25 (29) vs 32.6 ± 1.92 (17)) | (29.6 ± 1.66 (14) vs 34.4 ± 3.29 (8)) | 33.6 ± 1.77 (15) vs 31.1 ± 2.20 (9) | |
| CD4 | 0.121 | - | 0.213 |
| (414 ± 38.1 (20) vs 538 ± 65.0 (10)) | 408 ± 39.8 (19) vs 506 ± 63.4 (9) | ||
| SYS BP | 0.866 | 0.875 | 0.671 |
| 160 ± 2.32 (45) vs 160 ± 3.91 (12) | 158 ± 3.26 (23) vs 157 ± 8.69 (5) | 161 ± 3.37 (22) vs 163 ± 3.04 (7) | |
| DIA BP | 0.817 | 0.654 | 0.412 |
| 104 ± 1.57 (45) vs 105 ± 3.16 (12) | 102 ± 2.03 (23) vs 99.4 ± 6.04 (5) | 105 ± 2.43 (22) vs 108 ± 2.91 (7) | |
| Severe PE (%) | 0.0497 | 0.364 | 0.017 |
| 14 (38) vs 14 (61) | 7 (39) vs 6 (46) | 7 (37) vs 8 (80) | |
| EOPE (%) | 0.497 | 0.501 | 0.498 |
| 14 (38) vs 9 (39) | 5 (28) vs 4 (31) | 9 (47) vs 5 (50) | |
| IL-2 | 0.201 | 0.240 | 0.885 |
| 262 ± 4.78 (10) vs 282 ± 13.1 (7) | 268 ± 6.83 (4) vs 279 ± 5.09 (3) | 258 ± 6.54 (6) vs 260 ± 7.54 (3) | |
| IL-4 | 0.758 | 0.801 | 0.549 |
| (247 ± 8.18 (10) vs 251 ± 5.29 (7)) | 261 ± 18.9 (4) vs 255 ± 7.34 (4) | 238 ± 4.12 (6) vs 244 ± 7.08 (3) | |
| IL-6 | 0.095 | 0.534 | 0.334 |
| 139 ± 7.93 (10) vs 171 ± 15.5 (7) | 163 ± 14.5 (3) vs 181 ± 22.7 (4) | 128 ± 6.66 (7) vs 158 ± 22.3 (3) | |
| IL-10 | 0.895 | 0.697 | 0.107 |
| 147 ± 70.3 (9) vs 133 ± 70.4 (6) | 273 ± 140 (4) vs 188 ± 147 (3) | 45.4 ± 15.8 (5) vs 78.5 ± 2.77 (3) | |
| IL-17a | 0.758 | 0.475 | 0.511 |
| 1430 ± 313 (9) vs 1690 ± 728 (6) | 820 ± 32.1 (4) vs 750 ± 79.3 (4) | 1920 ± 466 (5) vs 3550 ± 1630 (2) | |
| TNF-α | 0.920 | 0.418 | 0.316 |
| 186 ± 15.4 (11) vs 183 ± 25.2 (7) | 227 ± 25.4 (4) vs 179 ± 45.5 (4) | 164 ± 14.0 (7) vs 189 ± 16.9 (3) | |
| IFN-γ | 0.315 | 0.507 | 0.668 |
| 206 ± 17.0 (11) vs 227 ± 11.2 (6) | 201 ± 50.4 (4) vs 240 ± 10.6 (4) | 208 ± 5.02 (7) vs 200 ± 12.6 (2) | |
Mean ± SEM (n)
Abbreviations: BMI body mass index (kg/m2), EOPE early onset preeclampsia, SYS systolic, DIA diastolic, BP blood pressure (mmHg), IL interleukin, TNF-α tumour necrosis factor alpha, IFN-γ interferon gamma
a p value