Literature DB >> 28101645

Forensic parameters of 19 X-STR polymorphisms in two Chinese populations.

Chuncao Deng1, Feng Song1, Jienan Li1, Yi Ye2, Lushun Zhang3, Weibo Liang1, Haibo Luo4, Yingbi Li5.   

Abstract

Application of X-STRs as complements of autosomal STR application in the forensic genetics has become a tendency for kinship testing, especially in deficiency paternity cases. Recently, a novel kit of 19 X-STR loci was developed, which permitted the analysis of 19 STR in the same PCR reaction, and these markers can be clustered into seven groups for the physical linkage. The objective of this study was to evaluate the allele and haplotype diversity of 19 X-STR loci in the Uygur (n = 220) and Tibetan nationality (n = 270) and to estimate the usefulness for complex kinship analysis. In the Tibetan and Uygur populations, a total of alleles of all loci were 188 and 212, with the allele frequencies ranged from 0.0037 to 0.5593 and from 0.0045 to 0.5409, respectively. Compared with previous studies, DXS10135 was the most polymorphic locus in the two population groups, whereas the least variant locus was DXS10164 in the Uygur population and DXS7423 in the Tibetan nationality. Haplotype diversity obtained in this investigation was greater than 0.9 across all LGs. This study indicated the new kit could be used as a supplementary tool in kinship testing in China. In addition, the data sets can be used as supplementary national X-STR references to enlarge the database.

Entities:  

Keywords:  Population genetics; Tibetan; Uygur; X-STR

Mesh:

Year:  2017        PMID: 28101645     DOI: 10.1007/s00414-017-1538-1

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  12 in total

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Authors:  Michael Nothnagel; Reinhard Szibor; Oliver Vollrath; Christa Augustin; Jeanett Edelmann; Maria Geppert; Cíntia Alves; Leonor Gusmão; Marielle Vennemann; Yiping Hou; Uta-Dorothee Immel; Serena Inturri; Haibo Luo; Sabine Lutz-Bonengel; Carlo Robino; Lutz Roewer; Burkhard Rolf; Juliane Sanft; Kyoung-Jin Shin; Jeong Eun Sim; Peter Wiegand; Christian Winkler; Michael Krawczak; Sandra Hering
Journal:  Forensic Sci Int Genet       Date:  2012-03-27       Impact factor: 4.882

Review 2.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

3.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

4.  Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material.

Authors:  P S Walsh; D A Metzger; R Higuchi
Journal:  Biotechniques       Date:  1991-04       Impact factor: 1.993

5.  Characteristics of eight X-STR loci for forensic purposes in the Chinese population.

Authors:  Hai-bo Luo; Yi Ye; Yan-yun Wang; Wei-bo Liang; Li-bing Yun; Miao Liao; Jing Yan; Jin Wu; Ying-bi Li; Yi-ping Hou
Journal:  Int J Legal Med       Date:  2009-11-19       Impact factor: 2.686

6.  Population genetics for Y-chromosomal STRs haplotypes of Chinese Tibetan ethnic minority group in Tibet.

Authors:  Bofeng Zhu; Shunzhi Liu; Dan Ci; Jingfeng Huang; Youcai Wang; Liping Chen; Jun Zhu; Yongcheng Xu; Qianzi Zhao; Shengbin Li; Yao Liu
Journal:  Forensic Sci Int       Date:  2005-11-18       Impact factor: 2.395

7.  Multiplex PCR for 18 X-chromosomal STRs in Japanese population.

Authors:  Yasutaka Nakamura; Michinaga Samejima; Keiji Tamaki; Kiyoshi Minaguchi
Journal:  Leg Med (Tokyo)       Date:  2012-12-06       Impact factor: 1.376

8.  Population data of 21 non-CODIS STR loci in the Chinese Uygur ethnic minority.

Authors:  Feng Song; Hai-bo Luo; Yi-ping Hou
Journal:  Forensic Sci Int Genet       Date:  2014-04-30       Impact factor: 4.882

9.  Allele and haplotype diversity of new multiplex of 19 ChrX-STR loci in Han population from Guanzhong region (China).

Authors:  Yu-Dang Zhang; Chun-Mei Shen; Hao-Tian Meng; Yu-Xin Guo; Qian Dong; Guang Yang; Jiang-Wei Yan; Yao-Shun Liu; Ting Mei; Rui-Zhe Huang; Bo-Feng Zhu
Journal:  Electrophoresis       Date:  2016-05-25       Impact factor: 3.535

10.  Genetic polymorphism analyses of a novel panel of 19 X-STR loci in the Chinese Uygur ethnic minority.

Authors:  Yu-Xin Guo; Jian-Gang Chen; Yan Wang; Jiang-Wei Yan; Jing Chen; Tian-Hua Yao; Li-Ping Zhang; Guang Yang; Hao-Tian Meng; Yu-Dang Zhang; Ting Mei; Yao-Shun Liu; Qian Dong; Bo-Feng Zhu
Journal:  J Zhejiang Univ Sci B       Date:  2016-05       Impact factor: 3.066

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  4 in total

1.  Genetic portrait and phylogenetic analysis of an Aksu Uyghur population based on the 19 X-STR system.

Authors:  Ye Li; Jihong Zeng; Yujiang Fan; Guanglin He; Mingkun Xie; Tianzhen Gao; Shouyu Wang; Jin Wu
Journal:  Int J Legal Med       Date:  2018-05-19       Impact factor: 2.686

2.  X-chromosomal STR-based genetic structure of Sichuan Tibetan minority ethnicity group and its relationships to various groups.

Authors:  Guanglin He; Ye Li; Xing Zou; Ying Zhang; Hepei Li; Mengge Wang; Jin Wu
Journal:  Int J Legal Med       Date:  2017-09-03       Impact factor: 2.686

3.  Forensic characterization and genetic polymorphisms of 19 X-chromosomal STRs in 1344 Han Chinese individuals and comprehensive population relationship analyses among 20 Chinese groups.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Fuquan Jia; Huiru Bai; Jida Li; Jian Yu; Yanyan Han
Journal:  PLoS One       Date:  2018-09-20       Impact factor: 3.240

4.  Genetic structure and polymorphisms of Gelao ethnicity residing in southwest china revealed by X-chromosomal genetic markers.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Haibo Luo; Limei Yu; Xijie Hu; Mijia Xia; Hongyan Gao; Jian Yu; Yiping Hou; Yanyan Han
Journal:  Sci Rep       Date:  2018-10-01       Impact factor: 4.379

  4 in total

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