Literature DB >> 28092657

Lipid production in Yarrowia lipolytica is maximized by engineering cytosolic redox metabolism.

Kangjian Qiao1, Thomas M Wasylenko1, Kang Zhou1, Peng Xu1, Gregory Stephanopoulos1.   

Abstract

Microbial factories have been engineered to produce lipids from carbohydrate feedstocks for production of biofuels and oleochemicals. However, even the best yields obtained to date are insufficient for commercial lipid production. To maximize the capture of electrons generated from substrate catabolism and thus increase substrate-to-product yields, we engineered 13 strains of Yarrowia lipolytica with synthetic pathways converting glycolytic NADH into the lipid biosynthetic precursors NADPH or acetyl-CoA. A quantitative model was established and identified the yield of the lipid pathway as a crucial determinant of overall process yield. The best engineered strain achieved a productivity of 1.2 g/L/h and a process yield of 0.27 g-fatty acid methyl esters/g-glucose, which constitutes a 25% improvement over previously engineered yeast strains. Oxygen requirements of our highest producer were reduced owing to decreased NADH oxidization by aerobic respiration. We show that redox engineering could enable commercialization of microbial carbohydrate-based lipid production.

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Year:  2017        PMID: 28092657     DOI: 10.1038/nbt.3763

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  33 in total

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Authors:  Andrew M Silverman; Kangjian Qiao; Peng Xu; Gregory Stephanopoulos
Journal:  Appl Microbiol Biotechnol       Date:  2016-02-26       Impact factor: 4.813

2.  Enhancing fatty acid production by the expression of the regulatory transcription factor FadR.

Authors:  Fuzhong Zhang; Mario Ouellet; Tanveer S Batth; Paul D Adams; Christopher J Petzold; Aindrila Mukhopadhyay; Jay D Keasling
Journal:  Metab Eng       Date:  2012-09-28       Impact factor: 9.783

3.  Characterization of the two intracellular lipases of Y. lipolytica encoded by TGL3 and TGL4 genes: new insights into the role of intracellular lipases and lipid body organisation.

Authors:  Thierry Dulermo; Brigitte Tréton; Athanasios Beopoulos; Affoué Philomène Kabran Gnankon; Ramdane Haddouche; Jean-Marc Nicaud
Journal:  Biochim Biophys Acta       Date:  2013-07-13

4.  Overproduction and secretion of free fatty acids through disrupted neutral lipid recycle in Saccharomyces cerevisiae.

Authors:  Christopher Leber; Brian Polson; Ruben Fernandez-Moya; Nancy A Da Silva
Journal:  Metab Eng       Date:  2014-11-25       Impact factor: 9.783

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Authors:  Mingjie Jin; Patricia J Slininger; Bruce S Dien; Suresh Waghmode; Bryan R Moser; Andrea Orjuela; Leonardo da Costa Sousa; Venkatesh Balan
Journal:  Trends Biotechnol       Date:  2014-12-04       Impact factor: 19.536

6.  Replacing Escherichia coli NAD-dependent glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with a NADP-dependent enzyme from Clostridium acetobutylicum facilitates NADPH dependent pathways.

Authors:  Irene Martínez; Jiangfeng Zhu; Henry Lin; George N Bennett; Ka-Yiu San
Journal:  Metab Eng       Date:  2008-09-23       Impact factor: 9.783

Review 7.  Oleaginous yeasts for biodiesel: current and future trends in biology and production.

Authors:  Irnayuli R Sitepu; Luis A Garay; Ryan Sestric; David Levin; David E Block; J Bruce German; Kyria L Boundy-Mills
Journal:  Biotechnol Adv       Date:  2014-08-27       Impact factor: 14.227

8.  Production of omega-3 eicosapentaenoic acid by metabolic engineering of Yarrowia lipolytica.

Authors:  Zhixiong Xue; Pamela L Sharpe; Seung-Pyo Hong; Narendra S Yadav; Dongming Xie; David R Short; Howard G Damude; Ross A Rupert; John E Seip; Jamie Wang; Dana W Pollak; Michael W Bostick; Melissa D Bosak; Daniel J Macool; Dieter H Hollerbach; Hongxiang Zhang; Dennis M Arcilla; Sidney A Bledsoe; Kevin Croker; Elizabeth F McCord; Bjorn D Tyreus; Ethel N Jackson; Quinn Zhu
Journal:  Nat Biotechnol       Date:  2013-07-21       Impact factor: 54.908

9.  Regulatory properties of malic enzyme in the oleaginous yeast, Yarrowia lipolytica, and its non-involvement in lipid accumulation.

Authors:  Huaiyuan Zhang; Luning Zhang; Haiqin Chen; Yong Q Chen; Colin Ratledge; Yuanda Song; Wei Chen
Journal:  Biotechnol Lett       Date:  2013-07-27       Impact factor: 2.461

10.  Modular optimization of multi-gene pathways for fatty acids production in E. coli.

Authors:  Peng Xu; Qin Gu; Wenya Wang; Lynn Wong; Adam G W Bower; Cynthia H Collins; Mattheos A G Koffas
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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Journal:  Appl Environ Microbiol       Date:  2017-09-29       Impact factor: 4.792

2.  Gene Excision by Dual-Guide CRISPR-Cas9.

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Journal:  Methods Mol Biol       Date:  2021

3.  Simultaneous Gene Excision and Integration by Dual-Guide CRISPR-Cas9.

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Journal:  Methods Mol Biol       Date:  2021

4.  Engineering yeast phospholipid metabolism for de novo oleoylethanolamide production.

Authors:  Yi Liu; Quanli Liu; Anastasia Krivoruchko; Sakda Khoomrung; Jens Nielsen
Journal:  Nat Chem Biol       Date:  2019-12-16       Impact factor: 15.040

5.  Adaptive laboratory evolution of Yarrowia lipolytica improves ferulic acid tolerance.

Authors:  Zedi Wang; Linlin Zhou; Minrui Lu; Yuwei Zhang; Samina Perveen; Huarong Zhou; Zhiqiang Wen; Zhaoxian Xu; Mingjie Jin
Journal:  Appl Microbiol Biotechnol       Date:  2021-02-01       Impact factor: 4.813

Review 6.  Synthetic biology, systems biology, and metabolic engineering of Yarrowia lipolytica toward a sustainable biorefinery platform.

Authors:  Jingbo Ma; Yang Gu; Monireh Marsafari; Peng Xu
Journal:  J Ind Microbiol Biotechnol       Date:  2020-07-04       Impact factor: 3.346

7.  CRISPR Interference and Activation to Modulate Transcription in Yarrowia lipolytica.

Authors:  Joshua Misa; Cory Schwartz
Journal:  Methods Mol Biol       Date:  2021

Review 8.  Microbial production of advanced biofuels.

Authors:  Jay Keasling; Hector Garcia Martin; Taek Soon Lee; Aindrila Mukhopadhyay; Steven W Singer; Eric Sundstrom
Journal:  Nat Rev Microbiol       Date:  2021-06-25       Impact factor: 60.633

9.  Metabolic engineering of Corynebacterium glutamicum for improved L-arginine synthesis by enhancing NADPH supply.

Authors:  Milin Zhan; Baojun Kan; Jinjun Dong; Guochao Xu; Ruizhi Han; Ye Ni
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-16       Impact factor: 3.346

10.  Understanding Functional Roles of Native Pentose-Specific Transporters for Activating Dormant Pentose Metabolism in Yarrowia lipolytica.

Authors:  Seunghyun Ryu; Cong T Trinh
Journal:  Appl Environ Microbiol       Date:  2018-01-17       Impact factor: 4.792

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