Literature DB >> 28090288

Expression profiling elucidates a molecular gene signature for pulmonary hypertension in sarcoidosis.

Sunit Singla1, Tong Zhou2, Kamran Javaid1, Taimur Abbasi3, Nancy Casanova4, Wei Zhang5, Shwu-Fan Ma6, Michael S Wade3, Imre Noth6, Nadera J Sweiss7, Joe G N Garcia4, Roberto F Machado3.   

Abstract

Pulmonary hypertension (PH), when it complicates sarcoidosis, carries a poor prognosis, in part because it is difficult to detect early in patients with worsening respiratory symptoms. Pathogenesis of sarcoidosis occurs via incompletely characterized mechanisms that are distinct from the mechanisms of pulmonary vascular remodeling well known to occur in conjunction with other chronic lung diseases. To address the need for a biomarker to aid in early detection as well as the gap in knowledge regarding the mechanisms of PH in sarcoidosis, we used genome-wide peripheral blood gene expression analysis and identified an 18-gene signature capable of distinguishing sarcoidosis patients with PH (n = 8), sarcoidosis patients without PH (n = 17), and healthy controls (n = 45). The discriminative accuracy of this 18-gene signature was 100% in separating sarcoidosis patients with PH from those without it. If validated in a large replicate cohort, this signature could potentially be used as a diagnostic molecular biomarker for sarcoidosis-associated PH.

Entities:  

Keywords:  gene signature; peripheral blood mononuclear cells; pulmonary hypertension; sarcoidosis

Year:  2016        PMID: 28090288      PMCID: PMC5210052          DOI: 10.1086/688316

Source DB:  PubMed          Journal:  Pulm Circ        ISSN: 2045-8932            Impact factor:   3.017


  53 in total

1.  Gene microarray analysis of peripheral blood cells in pulmonary arterial hypertension.

Authors:  Todd M Bull; Christopher D Coldren; Mark Moore; Sylk M Sotto-Santiago; David V Pham; S Patrick Nana-Sinkam; Norbert F Voelkel; Mark W Geraci
Journal:  Am J Respir Crit Care Med       Date:  2004-06-23       Impact factor: 21.405

2.  RGS19 stimulates cell proliferation by deregulating cell cycle control and enhancing Akt signaling.

Authors:  Prudence H Tso; Lisa Y Yung; Yingchun Wang; Yung H Wong
Journal:  Cancer Lett       Date:  2011-06-25       Impact factor: 8.679

3.  Distinctive clinical, radiographic, and functional characteristics of patients with sarcoidosis-related pulmonary hypertension.

Authors:  Roxana Sulica; Alvin S Teirstein; Shudhir Kakarla; Nimish Nemani; Anousheh Behnegar; Maria L Padilla
Journal:  Chest       Date:  2005-09       Impact factor: 9.410

4.  Enhanced deacetylation of p53 by the anti-apoptotic protein HSCO in association with histone deacetylase 1.

Authors:  Hisako Higashitsuji; Hiroaki Higashitsuji; Tomoko Masuda; Yu Liu; Katsuhiko Itoh; Jun Fujita
Journal:  J Biol Chem       Date:  2007-03-12       Impact factor: 5.157

5.  Arresting cancer proliferation by small-molecule gene regulation.

Authors:  Liliane A Dickinson; Ryan Burnett; Christian Melander; Benjamin S Edelson; Paramjit S Arora; Peter B Dervan; Joel M Gottesfeld
Journal:  Chem Biol       Date:  2004-11

6.  A novel molecular signature for elevated tricuspid regurgitation velocity in sickle cell disease.

Authors:  Ankit A Desai; Tong Zhou; Homaa Ahmad; Wei Zhang; Wenbo Mu; Sharon Trevino; Michael S Wade; Nalini Raghavachari; Gregory J Kato; Marlene H Peters-Lawrence; Tejas Thiruvoipati; Kristin Turner; Nicole Artz; Yong Huang; Amit R Patel; Jason X-J Yuan; Victor R Gordeuk; Roberto M Lang; Joe G N Garcia; Roberto F Machado
Journal:  Am J Respir Crit Care Med       Date:  2012-06-07       Impact factor: 21.405

7.  Predicting mortality in patients with sarcoidosis awaiting lung transplantation.

Authors:  Andrew F Shorr; Darcy B Davies; Steven D Nathan
Journal:  Chest       Date:  2003-09       Impact factor: 9.410

Review 8.  Genetics and genomics of pulmonary arterial hypertension.

Authors:  Florent Soubrier; Wendy K Chung; Rajiv Machado; Ekkehard Grünig; Micheala Aldred; Mark Geraci; James E Loyd; C Gregory Elliott; Richard C Trembath; John H Newman; Marc Humbert
Journal:  J Am Coll Cardiol       Date:  2013-12-24       Impact factor: 24.094

9.  Characterization of the loss of SUMO pathway function on cancer cells and tumor proliferation.

Authors:  Xingyue He; Jessica Riceberg; Sai M Pulukuri; Steve Grossman; Vaishali Shinde; Pooja Shah; James E Brownell; Larry Dick; John Newcomb; Neil Bence
Journal:  PLoS One       Date:  2015-04-10       Impact factor: 3.240

10.  SNPinProbe_1.0: a database for filtering out probes in the Affymetrix GeneChip human exon 1.0 ST array potentially affected by SNPs.

Authors:  Shiwei Duan; Wei Zhang; Wasim Kamel Bleibel; Nancy Jean Cox; M Eileen Dolan
Journal:  Bioinformation       Date:  2008-08-01
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  4 in total

1.  A Review of Transcriptome Analysis in Pulmonary Vascular Diseases.

Authors:  Dustin R Fraidenburg; Roberto F Machado
Journal:  Methods Mol Biol       Date:  2018

2.  The Serum Expression of Selected miRNAs in Pulmonary Sarcoidosis with/without Löfgren's Syndrome.

Authors:  Eva Novosadova; Alzbeta Chabronova; Vitezslav Kolek; Martin Petrek; Zdenka Navratilova
Journal:  Mediators Inflamm       Date:  2016-12-05       Impact factor: 4.711

Review 3.  Treatments for Pulmonary Ricin Intoxication: Current Aspects and Future Prospects.

Authors:  Yoav Gal; Ohad Mazor; Reut Falach; Anita Sapoznikov; Chanoch Kronman; Tamar Sabo
Journal:  Toxins (Basel)       Date:  2017-10-03       Impact factor: 4.546

Review 4.  Precision medicine: The future of diagnostic approach to pulmonary hypertension?

Authors:  Piotr Kedzierski; Adam Torbicki
Journal:  Anatol J Cardiol       Date:  2019-09       Impact factor: 1.596

  4 in total

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